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A Metadata Extraction Approach for Clinical Case Reports to Enable Advanced Understanding of Biomedical Concepts
Published on: September 20, 2018
Practical Guide to Natural Language Processing for Radiology
Ali Mozayan1, Alexander R Fabbri1, Michelle Maneevese1
1From the Department of Radiology and Biomedical Imaging, Yale School of Medicine, PO Box 208042, Tompkins East 2, New Haven, CT 06520 (A.M., M.M., I.T., S.C.); and Department of Computer Science, Yale University, New Haven, Conn (A.R.F.).
Abstract:
Natural language processing (NLP) is the subset of artificial intelligence focused on the computer interpretation of human language. It is an invaluable tool in the analysis, aggregation, and simplification of free text. It has already demonstrated significant potential in the analysis of radiology reports. There are abundant open-source libraries and tools available that facilitate its application to the benefit of radiology. Radiologists who understand its limitations and potential will be better positioned to evaluate NLP models, understand how they can improve clinical workflow, and facilitate research endeavors involving large amounts of human language. The advent of increasingly affordable and powerful computer processing, the large quantities of medical and radiologic data, and advances in machine learning algorithms have contributed to the large potential of NLP. In turn, radiology has significant potential to benefit from the ability of NLP to convert relatively standardized radiology reports to machine-readable data. NLP benefits from standardized reporting, but because of its ability to interpret free text by using context clues, NLP does not necessarily depend on it. An overview and practical approach to NLP is featured, with specific emphasis on its applications to radiology. A brief history of NLP, the strengths and challenges inherent to its use, and freely available resources and tools are covered to guide further exploration and study within the field. Particular attention is devoted to the recent development of the Word2Vec and BERT (Bidirectional Encoder Representations from Transformers) language models, which have exponentially increased the power and utility of NLP for a variety of applications. Online supplemental material is available for this article. ©RSNA, 2021.
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