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Gain from genomic selection for a selection index in two-row spring barley
Daniel W Sweeney1, Travis E Rooney1, Mark E Sorrells1
1Plant Breeding and Genetics Section, School of Integrative Plant Sciences, Cornell University, Ithaca, NY, 14853, USA.
The Plant Genome
|September 5, 2021
Summary
Genomic selection (GS) accelerates genetic gain in malting barley breeding more effectively than phenotypic selection (PS). GS improved overall selection index, height, and preharvest sprouting resistance, but not heading date or spot blotch resistance.
Area of Science:
- Plant breeding
- Quantitative genetics
- Agricultural science
Background:
- Genomic selection (GS) offers potential to accelerate genetic gain in new breeding programs.
- Selection index (SI) combines multiple traits, but empirical studies comparing GS and phenotypic selection (PS) on SI values are limited.
Purpose of the Study:
- Compare genetic gain in overall SI value for malting barley using GS versus PS.
- Evaluate the impact of GS on genetic variance and inbreeding for multiple traits.
Main Methods:
- Two cycles of GS and one cycle of PS were implemented in two-row spring malting barley.
- Selection was based on overall SI values for height, heading date, preharvest sprouting (PHS) resistance, and spot blotch resistance.
Main Results:
- GS achieved higher realized gain for SI value, height, and PHS compared to PS.
- GS did not significantly improve gain for heading date and spot blotch resistance.
- GS substantially reduced genetic variances for heavily weighted traits (PHS, germination) and increased inbreeding, though restricted mating mitigated this.
Conclusions:
- Genomic selection is a valuable tool for accelerating genetic gain on selection index values in malting barley.
- GS is effective for traits with higher index weights, such as PHS resistance.
- Managing inbreeding is crucial when implementing GS in breeding programs.

