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Published on: September 17, 2020
Interactions Between Genes From Aging Pathways May Influence Human Lifespan and Improve Animal to Human Translation
Svetlana Ukraintseva1, Matt Duan1, Konstantin Arbeev1
1Biodemography of Aging Research Unit, Duke University, Durham, NC, United States.
Abstract:
A major goal of aging research is identifying genetic targets that could be used to slow or reverse aging - changes in the body and extend limits of human lifespan. However, majority of genes that showed the anti-aging and pro-survival effects in animal models were not replicated in humans, with few exceptions. Potential reasons for this lack of translation include a highly conditional character of genetic influence on lifespan, and its heterogeneity, meaning that better survival may be result of not only activity of individual genes, but also gene-environment and gene-gene interactions, among other factors. In this paper, we explored associations of genetic interactions with human lifespan. We selected candidate genes from well-known aging pathways (IGF1/FOXO growth signaling, P53/P16 apoptosis/senescence, and mTOR/SK6 autophagy and survival) that jointly decide on outcomes of cell responses to stress and damage, and so could be prone to interactions. We estimated associations of pairwise statistical epistasis between SNPs in these genes with survival to age 85+ in the Atherosclerosis Risk in Communities study, and found significant (FDR < 0.05) effects of interactions between SNPs in IGF1R, TGFBR2, and BCL2 on survival 85+. We validated these findings in the Cardiovascular Health Study sample, with P < 0.05, using survival to age 85+, and to the 90th percentile, as outcomes. Our results show that interactions between SNPs in genes from the aging pathways influence survival more significantly than individual SNPs in the same genes, which may contribute to heterogeneity of lifespan, and to lack of animal to human translation in aging research.
Insights
Genetic interactions, not just individual genes, significantly impact human lifespan and survival past age 85. This finding helps explain why anti-aging discoveries in animals often fail to translate to humans.
Area of Science:
- Genetics and Longevity Research
- Human Lifespan Determinants
Background:
- Identifying genetic factors to slow aging and extend human lifespan is a key research goal.
- Many genes showing anti-aging effects in animal models do not translate to humans, possibly due to complex genetic interactions and environmental factors.
Purpose of the Study:
- To investigate the association between genetic interactions (epistasis) within aging pathways and human lifespan.
- To explore how gene-gene interactions contribute to the heterogeneity of human aging and survival.
Main Methods:
- Selected candidate genes from established aging pathways: IGF1/FOXO, P53/P16, and mTOR/SK6.
- Analyzed pairwise statistical epistasis between single nucleotide polymorphisms (SNPs) in these genes.
- Utilized data from the Atherosclerosis Risk in Communities (ARIC) study and the Cardiovascular Health Study (CHS) for validation.
Main Results:
- Identified significant interactions between SNPs in IGF1R, TGFBR2, and BCL2 genes associated with survival to age 85+ (FDR < 0.05).
- Validated these interaction findings in the CHS cohort (P < 0.05) for survival to age 85+ and the 90th percentile.
- Gene interactions demonstrated a more significant impact on survival than individual SNPs within the studied aging pathways.
Conclusions:
- Genetic interactions within key aging pathways play a crucial role in determining human lifespan and survival.
- These interactions may explain the observed heterogeneity in human aging and the challenges in translating animal aging research findings to humans.
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