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A Dual-Site Inhibitor of CBP/p300 KIX is a Selective and Effective Modulator of Myb
Stephen T Joy1, Madeleine J Henley1,2, Samantha N De Salle1,2
1Life Sciences Institute, University of Michigan, Ann Arbor, Michigan 48109, United States.
Abstract:
The protein-protein interaction between the KIX motif of the transcriptional coactivator CBP/p300 and the transcriptional activator Myb is a high-value target due to its established role in certain acute myeloid leukemias (AML) and potential contributions to other cancers. However, the CBP/p300 KIX domain has multiple binding sites, several structural homologues, many binding partners, and substantial conformational plasticity, making it challenging to specifically target using small-molecule inhibitors. Here, we report a picomolar dual-site inhibitor (MybLL-tide) of the Myb-CBP/p300 KIX interaction. MybLL-tide has higher affinity for CBP/p300 KIX than any previously reported compounds while also possessing 5600-fold selectivity for the CBP/p300 KIX domain over other coactivator domains. MybLL-tide blocks the association of CBP and p300 with Myb in the context of the proteome, leading to inhibition of key Myb·KIX-dependent genes in AML cells. These results show that MybLL-tide is an effective, modifiable tool to selectively target the KIX domain and assess transcriptional effects in AML cells and potentially other cancers featuring aberrant Myb behavior. Additionally, the dual-site design has applicability to the other challenging coactivators that bear multiple binding surfaces.
Insights
Researchers developed MybLL-tide, a potent dual-site inhibitor targeting the Myb-CBP/p300 KIX interaction crucial in acute myeloid leukemia (AML) and other cancers.
Area of Science:
- Biochemistry
- Molecular Biology
- Cancer Research
Background:
- The interaction between the KIX motif of CBP/p300 and the transcriptional activator Myb is implicated in certain acute myeloid leukemias (AML) and other cancers.
- The CBP/p300 KIX domain presents a challenging target for small-molecule inhibitors due to its multiple binding sites, structural similarities to other domains, numerous binding partners, and conformational flexibility.
Purpose of the Study:
- To develop a highly specific and potent small-molecule inhibitor targeting the Myb-CBP/p300 KIX interaction.
- To investigate the efficacy of the developed inhibitor in blocking Myb-driven gene expression in AML cells.
Main Methods:
- Design and synthesis of a picomolar dual-site inhibitor, MybLL-tide.
- Affinity and selectivity profiling of MybLL-tide against the CBP/p300 KIX domain and other coactivator domains.
- Assessment of MybLL-tide's ability to inhibit Myb·KIX-dependent gene expression in AML cells within the proteomic context.
Main Results:
- MybLL-tide demonstrated picomolar affinity for the CBP/p300 KIX domain, significantly higher than previously reported compounds.
- The inhibitor exhibited exceptional selectivity, with a 5600-fold preference for the CBP/p300 KIX domain over other coactivator domains.
- MybLL-tide effectively blocked CBP and p300 association with Myb in cells, leading to the inhibition of key Myb·KIX-dependent genes in AML cells.
Conclusions:
- MybLL-tide is a highly effective and modifiable tool for selectively targeting the CBP/p300 KIX domain.
- This inhibitor can be used to assess transcriptional effects in AML cells and potentially other cancers with aberrant Myb activity.
- The dual-site inhibition strategy holds promise for targeting other challenging coactivator domains with multiple binding surfaces.
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