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MRI-based brain tumor segmentation using FPGA-accelerated neural network.

Siyu Xiong1, Guoqing Wu2, Xitian Fan3

  • 1State Key Laboratory of ASIC an System, Fudan University, Shanghai, China.

BMC Bioinformatics
|September 8, 2021
PubMed
Summary
This summary is machine-generated.

This study introduces an FPGA accelerator for faster and more efficient brain tumor segmentation. The new system significantly speeds up processing while reducing power consumption, aiding in remote diagnosis.

Keywords:
Brain tumor segmatationFPGA accelerationNeural network

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Area of Science:

  • Medical Image Analysis
  • Computer-Aided Detection
  • Deep Learning

Background:

  • Brain tumor segmentation is complex, time-consuming, and prone to errors.
  • Deep learning methods improve accuracy but demand high computational resources.
  • Efficient brain tumor segmentation is crucial for timely diagnosis and treatment.

Purpose of the Study:

  • To develop a computer-aided detection system for efficient brain tumor segmentation.
  • To accelerate the deep learning-based brain tumor segmentation process.
  • To reduce computational complexity and power consumption in brain tumor segmentation.

Main Methods:

  • Quantization and retraining of neural networks for brain tumor segmentation.
  • Merging batch normalization layers to reduce model size and complexity.
  • Designing an FPGA-based accelerator for the quantized neural network model.

Main Results:

  • The FPGA accelerator demonstrated significant speed improvements over GPU and CPU.
  • Achieved 5.21x and 44.47x speedup compared to TITAN V GPU and Xeon CPU, respectively.
  • Showcased 11.22x and 82.33x greater energy efficiency than GPU and CPU.

Conclusions:

  • FPGA accelerator enhances brain tumor segmentation speed and reduces power consumption.
  • The developed system ensures high segmentation accuracy, crucial for clinical applications.
  • This approach offers a new direction for automated segmentation and remote diagnosis of brain tumors.