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Updated: Oct 21, 2025

An Allele-specific Gene Expression Assay to Test the Functional Basis of Genetic Associations
Published on: November 3, 2010
Recovering genotypes and phenotypes using allele-specific genes
Gamze Gürsoy1,2, Nancy Lu3,4, Sarah Wagner5
1Program in Computational Biology and Bioinformatics, Yale University, New Haven, USA.
Abstract:
With the recent increase in RNA sequencing efforts using large cohorts of individuals, surveying allele-specific gene expression is becoming increasingly frequent. Here, we report that, despite not containing explicit variant information, a list of genes known to be allele-specific in an individual is enough to recover key variants and link the individuals back to their genotypes and phenotypes. This creates a privacy conundrum.
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