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Updated: Oct 21, 2025

In Silico Identification and Characterization of circRNAs During Host-Pathogen Interactions
Published on: October 21, 2022
The circular RNA circCPE regulates myoblast development by sponging miR-138
Wenxiu Ru1, Ao Qi1, Xuemei Shen1
1Key laboratory of Animal Genetics, Breeding and Reproduction of Shaanxi Province, College of Animal Science and Technology, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Background:
Skeletal muscle development, a long-term and complex process, is controlled by a set of the myogenic genes. Circular RNAs (circRNAs), a class of noncoding RNA, have been shown to regulate various biological processes. Recent studies indicate circRNAs may be involved in myogenesis, but the role and regulatory mechanism of circRNAs in myogenesis is largely unknown. In the present study, circCPE was firstly found to promote the bovine myoblast proliferation and inhibit cell apoptosis and differentiation by influencing the expression of FOXC1 in a miR138-mediated manner. And in vivo experiments revealed that overexpression of circCPE attenuates skeletal muscle regeneration.
Results:
We identified a novel circular RNA circCPE by analyzing circRNAs sequencing data of bovine muscle tissue. Sequencing verification, RNase R treatment and Actinomycin D treatment confirmed the circular nature of circCPE in bovine muscle. Functional assays showed that overexpression of circCPE could inhibit bovine myoblast apoptosis and differentiation, as well as facilitate cell proliferation. Moreover, in vivo experiments revealed that overexpression of circCPE attenuates skeletal muscle regeneration. In consideration of circRNA action as miRNAs sponge, we found that circCPE harbors miR-138 binding sites and absorbed miR-138. Mechanistically, the rescue experiments showed that the overexpression of circCPE can counteract the inhibitory effect of miR-138 on the cell proliferation and the accelerated effects on the differentiation and apoptosis. Subsequently, we found that circCPE sequester the inhibitory effect of miR-138 on FOXC1 so as to involve in myogenesis.
Conclusions:
Collectively, we constructed a novel circCPE/miR-138/FOXC1 regulatory network in bovine myogenesis, which further provide stronger evidence that circRNA involved in muscle development acting as miRNA sponge.
Insights
A novel circular RNA, circCPE, promotes bovine skeletal muscle growth by inhibiting cell apoptosis and differentiation. It acts as a sponge for miR-138, regulating FOXC1 expression and enhancing myogenesis.
Area of Science:
- Molecular Biology
- Genetics
- Developmental Biology
Background:
- Skeletal muscle development (myogenesis) is a complex process regulated by myogenic genes.
- Circular RNAs (circRNAs) are noncoding RNAs with regulatory roles in biological processes.
- The specific roles and mechanisms of circRNAs in myogenesis remain largely unexplored.
Purpose of the Study:
- To identify and characterize novel circRNAs involved in bovine myogenesis.
- To elucidate the regulatory mechanism of circCPE in skeletal muscle development.
- To investigate the interaction between circCPE, miR-138, and FOXC1 in bovine myoblasts.
Main Methods:
- CircRNA sequencing of bovine muscle tissue.
- Verification of circCPE's circular nature using sequencing, RNase R, and Actinomycin D treatments.
- In vitro functional assays (overexpression) in bovine myoblasts.
- In vivo skeletal muscle regeneration experiments.
- MiRNA binding site analysis and rescue experiments.
Main Results:
- A novel circRNA, circCPE, was identified in bovine muscle tissue.
- Overexpression of circCPE promoted bovine myoblast proliferation and inhibited apoptosis and differentiation.
- In vivo studies showed circCPE overexpression attenuated skeletal muscle regeneration.
- circCPE acts as a sponge for miR-138, sequestering its inhibitory effect on FOXC1.
- Rescue experiments confirmed circCPE counteracts miR-138's effects on proliferation, differentiation, and apoptosis.
Conclusions:
- A novel circCPE/miR-138/FOXC1 regulatory network was established in bovine myogenesis.
- circCPE plays a crucial role in promoting skeletal muscle development.
- This study provides evidence for circRNAs acting as miRNA sponges in muscle development.
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