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Structural Comparisons of Cefotaximase (CTX-M-ase) Sub Family 1
Ben A Shurina1, Richard C Page1,2
1Department of Chemistry and Biochemistry, Miami University, Oxford, OH, United States.
Abstract:
The cefotaximase or CTX-M, family of serine-β-lactamases represents a significant clinical concern due to the ability for these enzymes to confer resistance to a broad array of β-lactam antibiotics an inhibitors. This behavior lends CTX-M-ases to be classified as extended spectrum β-lactamases (ESBL). Across the family of CTX-M-ases most closely related to CTX-M-1, the structures of CTX-M-15 with a library of different ligands have been solved and serve as the basis of comparison within this review. Herein we focus on the structural changes apparent in structures of CTX-M-15 in complex with diazabicyclooctane (DABCO) and boronic acid transition state analog inhibitors. Interactions between a positive surface patch near the active site and complementary functional groups of the bound inhibitor play key roles in the dictating the conformations of active site residues. The insights provided by analyzing structures of CTX-M-15 in complex with DABCO and boronic acid transition state analog inhibitors and analyzing existing structures of CTX-M-64 offer opportunities to move closer to making predictions as to how CTX-M-ases may interact with potential drug candidates, setting the stage for the further development of new antibiotics and β-lactamase inhibitors.
Insights
Structural analysis of cefotaximase (CTX-M) enzymes, specifically CTX-M-15, reveals how inhibitors bind to active sites. These findings aid in developing new antibiotics and CTX-M inhibitors to combat resistance.
Area of Science:
- Biochemistry
- Structural Biology
- Medicinal Chemistry
Background:
- The cefotaximase (CTX-M) family of serine-β-lactamases are significant clinical threats, conferring resistance to broad-spectrum β-lactam antibiotics.
- CTX-M enzymes are classified as extended-spectrum β-lactamases (ESBLs) due to their resistance mechanisms.
Purpose of the Study:
- To analyze the structural basis of CTX-M-15 inhibition by specific ligands.
- To understand how inhibitor binding influences active site residue conformations in CTX-M enzymes.
Main Methods:
- X-ray crystallography was used to solve structures of CTX-M-15 in complex with diazabicyclooctane (DABCO) and boronic acid transition state analogs.
- Comparative structural analysis of CTX-M-15 and CTX-M-64 structures.
Main Results:
- Key interactions involve a positive surface patch near the CTX-M-15 active site and functional groups on bound inhibitors.
- These interactions dictate the conformational changes of active site residues upon inhibitor binding.
Conclusions:
- Structural insights from CTX-M-15-inhibitor complexes can inform the design of novel antibiotics and β-lactamase inhibitors.
- Understanding these interactions facilitates prediction of how CTX-M enzymes interact with potential drug candidates.
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