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Updated: Oct 20, 2025

Application of Optical Coherence Tomography to a Mouse Model of Retinopathy
Published on: January 12, 2022
Clinically relevant deep learning for detection and quantification of geographic atrophy from optical coherence
Gongyu Zhang1, Dun Jack Fu1, Bart Liefers2
1NIHR Biomedical Research Centre, Moorfields Eye Hospital NHS Foundation Trust, UCL Institute of Ophthalmology, London, UK.
A new deep-learning model accurately detects geographic atrophy (GA) from optical coherence tomography (OCT) scans. This AI tool matches expert grading, offering a faster, reliable method for monitoring this cause of blindness.
Area of Science:
- Ophthalmology
- Artificial Intelligence
- Medical Imaging
Background:
- Geographic atrophy (GA) is a severe complication of age-related macular degeneration (AMD) and a leading cause of global blindness.
- Current methods for GA detection and quantification lack speed, reliability, and objectivity, hindering disease monitoring and therapeutic development.
- Objective and automated detection of GA from optical coherence tomography (OCT) scans is crucial for clinical trials and patient care.
Purpose of the Study:
- To develop and validate a fully automated deep-learning method for detecting and quantifying geographic atrophy from OCT retinal scans.
- To assess the performance of the developed AI model against expert human graders.
Main Methods:
- A modified U-Net deep-learning architecture was employed to create models for segmenting GA and its features from Heidelberg Spectralis OCT scans.
- Model development utilized a manually segmented dataset of 5049 B-scans from 984 OCT volumes.
- External validation was performed on an independent dataset of 884 B-scans from 192 OCT volumes from patients receiving routine care.
Main Results:
- The deep-learning model achieved high agreement with expert consensus grading on the external validation dataset, with a median Dice Similarity Coefficient (DSC) of 0.96 and an intraclass correlation coefficient (ICC) of 0.93.
- The AI model outperformed the agreement between human graders (DSC 0.80, ICC 0.79).
- Independent models accurately segmented key GA features: retinal pigment epithelium loss (DSC 0.95), photoreceptor degeneration (DSC 0.96), and hypertransmission (DSC 0.97).
Conclusions:
- A validated deep-learning model demonstrates performance comparable to manual specialist assessment for geographic atrophy segmentation.
- Automated analysis of OCT scans using AI offers a promising approach for the diagnosis and prognosis of GA in clinical practice and research.
- Further clinical validation is recommended for widespread adoption in patient care.
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