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Isolation and Identification of Waterborne Antibiotic-Resistant Bacteria and Molecular Characterization of their Antibiotic Resistance Genes
Published on: March 3, 2023
Antimicrobial Resistance and Molecular Characterization of Citrobacter spp. Causing Extraintestinal Infections
Liyun Liu1, Ling Zhang2, Haijian Zhou1
1State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Research Units of Discovery of Unknown Bacteria and Function (2018RU010), Chinese Academy of Medical Sciences, Beijing, China.
Objectives:
This prospective study was carried out to investigate molecular characteristics and antimicrobial susceptibility patterns of Citrobacter spp. from extraintestinal infections.
Methods:
Forty-six clinical Citrobacter spp. isolates were isolated from hospital patients with extraintestinal infections and analyzed by multilocus sequence typing (MLST) using seven housekeeping genes. Antimicrobial susceptibility testing was performed by disk diffusion method according to the Clinical and Laboratory Standards Institute (CLSI) recommendations. Adhesion and cytotoxicity to HEp-2 cells were assessed.
Results:
The 46 clinical Citrobacter spp. isolates were typed into 38 sequence types (STs), 9 of which belonged to four clonal complexes (CCs). None of the isolates shared the same ST or CCs with isolates from other countries or from other parts of China. Over half of the isolates were multidrug-resistant (MDR), with 17/26 C. freundii, 5/6 C. braakii, and 3/14 C. koseri isolates being MDR. Moreover, four isolates were carbapenem resistant with resistance to imipenem or meropenem. Among eight quinolone resistant C. freundii, all had a mutation in codon 59 (Thr59Ile) in quinolone resistance determining region of the gyrA gene. Only a small proportion of the isolates were found to be highly cytotoxic and adhesive with no correlation to sample sources.
Conclusions:
There was a diverse range of Citrobacter isolates causing extraintestinal infections and a high prevalence of MDR.
Insights
Extraintestinal infections are caused by diverse Citrobacter species, with a high prevalence of multidrug-resistant (MDR) strains. Molecular typing revealed unique sequence types and clonal complexes within these resistant bacteria.
Area of Science:
- Microbiology
- Infectious Diseases
- Genetics
Background:
- Citrobacter species are increasingly recognized as significant pathogens causing extraintestinal infections.
- Understanding the molecular epidemiology and antimicrobial resistance patterns of these bacteria is crucial for effective treatment and control.
Purpose of the Study:
- To investigate the molecular characteristics of Citrobacter isolates from extraintestinal infections.
- To determine the antimicrobial susceptibility patterns of these isolates.
- To assess the adhesion and cytotoxicity of Citrobacter strains.
Main Methods:
- Multilocus sequence typing (MLST) using seven housekeeping genes was performed on 46 clinical Citrobacter isolates.
- Antimicrobial susceptibility testing was conducted using the disk diffusion method.
- Adhesion and cytotoxicity assays were performed on HEp-2 cells.
Main Results:
- Thirty-eight sequence types (STs) and four clonal complexes (CCs) were identified among the 46 isolates.
- Over half of the isolates were multidrug-resistant (MDR), including carbapenem-resistant strains.
- Quinolone resistance in C. freundii was associated with a specific gyrA gene mutation.
Conclusions:
- Citrobacter isolates causing extraintestinal infections exhibit significant genetic diversity.
- A high prevalence of multidrug-resistant (MDR) strains, including carbapenem resistance, was observed.
- Further research is needed to understand the clinical implications of Citrobacter virulence factors.
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