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Every normal cell or tissue is embedded in a complex local environment called stroma, consisting of different cell types, a basal membrane, and blood vessels. As normal cells mutate and develop into cancer cells, their local environment also changes to allow cancer progression. The tumor microenvironment (TME) consists of a complex cellular matrix of stromal cells and the developing tumor. The cross-talk between cancer cells and surrounding stromal cells is critical to disrupt normal tissue...
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The intratumoral microbiome: Characterization methods and functional impact.

Clément J F Heymann1, Jean-Marie Bard2, Marie-Françoise Heymann3

  • 1University of Amsterdam, Academic Medical Center, Swammerdam Institute for Life Sciences, Amsterdam, the Netherlands; Institut de Cancérologie de l'Ouest, Saint-Herblain, France.

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Live pathogenic bacteria are crucial in cancer research, offering metabolic engineering potential. Understanding tumor microbiomes aids in developing novel cancer therapies by identifying unique bacterial functions within specific cancer subtypes.

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MicrobiomeTherapeutic targetsTumor microenvironment

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Area of Science:

  • Oncology
  • Microbiology
  • Genomics

Background:

  • Live pathogenic bacteria, known for centuries, are now central to modern cancer research.
  • Their accessible genomes allow for metabolic engineering, with potential clinical applications.
  • Understanding the tumor microenvironment and its microbiome is key for developing effective cancer therapies.

Purpose of the Study:

  • To review methods for characterizing the tumor microbiome.
  • To discuss the functions of intracellular bacteria in oncological entities.
  • To explore the therapeutic potential of live pathogenic microbes in various cancer types.

Main Methods:

  • Review of current approaches for tumor microbiome characterization.
  • Analysis of next-generation sequencing and bioinformatics tools.
  • Examination of studies identifying intratumor bacteria in specific cancer subtypes.

Main Results:

  • Characterizing tumor microbiomes is challenging due to low bacterial biomass and high host DNA.
  • Recent advancements have confirmed the presence of intratumor bacteria in defined tumors.
  • Each cancer subtype exhibits a unique microbiome with distinct bacterial metabolic functions.

Conclusions:

  • Intratumor bacteria play significant roles in cancer development and progression.
  • Metabolically engineered bacteria show promise as targeted cancer therapeutics.
  • Further research into tumor-associated bacteria can lead to novel treatment strategies.