Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Reactions of α-Halocarbonyl Compounds: Nucleophilic Substitution01:17

Reactions of α-Halocarbonyl Compounds: Nucleophilic Substitution

3.5K
Nucleophilic substitution in α-halocarbonyl compounds can be achieved via an SN2 pathway. The reaction in α-haloketones is generally carried out with less basic nucleophiles. The use of strong basic nucleophiles leads to the generation of α-haloenolate ions, which often participate in other side reactions.
3.5K
ortho–para-Directing Deactivators: Halogens01:24

ortho–para-Directing Deactivators: Halogens

6.0K
Halogens are ortho–para directors. They are more electronegative than carbon. Therefore, as ring substituents, they can withdraw electrons through the inductive effect and deactivate the aromatic ring towards electrophilic substitution. Halogens also have an electron-donating resonance effect on the ring, which influences the orientation of the incoming electrophile. If an electrophile attacks at the ortho or the para position, the halogen donates electrons and stabilizes the intermediate...
6.0K
Structures of Aldehydes and Ketones01:04

Structures of Aldehydes and Ketones

10.6K
Vanillin—a flavoring agent in vanilla, cinnamaldehyde—a molecule responsible for the distinct smell of cinnamon, and acetone—a strong-smelling ingredient in nail polish removers, all belong to a class of carbonyl compounds called aldehydes and ketones (Figure 1). Although both aldehydes and ketones contain the characteristic carbonyl (C=O) bond, their chemical structures vary with respect to the groups directly attached to the carbonyl carbon.
In aldehydes (Figures 1a and 1b),...
10.6K
Electrophilic Addition to Alkynes: Halogenation02:38

Electrophilic Addition to Alkynes: Halogenation

8.9K
Introduction
Halogenation is another class of electrophilic addition reactions where a halogen molecule gets added across a π bond. In alkynes, the presence of two π bonds allows for the addition of two equivalents of halogens (bromine or chlorine). The addition of the first halogen molecule forms a trans-dihaloalkene as the major product and the cis isomer as the minor product. Subsequent addition of the second equivalent yields the tetrahalide.
8.9K
Molecular Shape and Polarity03:37

Molecular Shape and Polarity

65.3K
Dipole Moment of a Molecule
65.3K
Carbocations02:10

Carbocations

12.1K
Carbocations are one of the reaction intermediates formed during several nucleophilic substitutions or elimination reactions. A carbocation is an electron-deficient species with the central carbon atom having six electrons and three bonded atoms. The central carbon in a carbocation is sp2 hybridized with trigonal planar geometry. It has an empty p orbital perpendicular to the plane of the structure that can accept electrons. Thus, carbocations act as strong electrophiles and may react with any...
12.1K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Interconversion Mechanisms in H<sub>2</sub>N-O-NH<sub>2</sub>: Rotamerism, Pyramidal Inversion, or Akamptisomerism?

The journal of physical chemistry. A·2026
Same author

Chalcogen substitution co-tunes photochromism and hydrogen bonding in semicarbazone photoswitches.

Chemical science·2026
Same author

Neighbouring group participation hindered by force as a molecular design for covalent catch bonds.

Nature communications·2026
Same author

Surface curvature effects in neutral and protonated water clusters: insights from DFT and energy decomposition analysis.

Physical chemistry chemical physics : PCCP·2026
Same author

How fluorine substituents strengthen aryl C-H bonds.

Chemical science·2026
Same author

A Comprehensive Molecular Modeling Study of Phenyltriazolinone Derivatives as Protoporphyrinogen Oxidase (PPO) Inhibitors.

Chemistry & biodiversity·2026

Related Experiment Video

Updated: Oct 20, 2025

Isolating Free Carbenes, their Mixed Dimers and Organic Radicals
10:44

Isolating Free Carbenes, their Mixed Dimers and Organic Radicals

Published on: April 19, 2019

11.1K

Dipolar repulsion in α-halocarbonyl compounds revisited.

Daniela Rodrigues Silva1,2, Lucas de Azevedo Santos1,2, Trevor A Hamlin1

  • 1Department of Theoretical Chemistry, Amsterdam Institute of Molecular and Life Sciences (AIMMS), Amsterdam Center for Multiscale Modeling (ACMM), Vrije Universiteit Amsterdam, De Boelelaan 1083, 1081 HV Amsterdam, The Netherlands. f.m.bickelhaupt@vu.nl.

Physical Chemistry Chemical Physics : PCCP
|September 16, 2021
PubMed
Summary

This study reveals that molecular orbital theory, not just simple dipolar repulsion, explains rotational isomerism in haloacetaldehydes. Pauli repulsion, orbital interactions, and electrostatics dictate conformational preferences, with fluorine behaving uniquely due to its compact nature.

More Related Videos

From Molecules to Materials: Engineering New Ionic Liquid Crystals Through Halogen Bonding
06:44

From Molecules to Materials: Engineering New Ionic Liquid Crystals Through Halogen Bonding

Published on: March 24, 2018

69.2K
Preparation of a Corannulene-functionalized Hexahelicene by CopperI-catalyzed Alkyne-azide Cycloaddition of Nonplanar Polyaromatic Units
09:35

Preparation of a Corannulene-functionalized Hexahelicene by CopperI-catalyzed Alkyne-azide Cycloaddition of Nonplanar Polyaromatic Units

Published on: September 18, 2016

11.7K

Related Experiment Videos

Last Updated: Oct 20, 2025

Isolating Free Carbenes, their Mixed Dimers and Organic Radicals
10:44

Isolating Free Carbenes, their Mixed Dimers and Organic Radicals

Published on: April 19, 2019

11.1K
From Molecules to Materials: Engineering New Ionic Liquid Crystals Through Halogen Bonding
06:44

From Molecules to Materials: Engineering New Ionic Liquid Crystals Through Halogen Bonding

Published on: March 24, 2018

69.2K
Preparation of a Corannulene-functionalized Hexahelicene by CopperI-catalyzed Alkyne-azide Cycloaddition of Nonplanar Polyaromatic Units
09:35

Preparation of a Corannulene-functionalized Hexahelicene by CopperI-catalyzed Alkyne-azide Cycloaddition of Nonplanar Polyaromatic Units

Published on: September 18, 2016

11.7K

Area of Science:

  • Organic Chemistry
  • Computational Chemistry
  • Quantum Chemistry

Background:

  • Dipolar repulsion models, while useful, oversimplify molecular conformations.
  • Understanding conformational preferences is crucial in organic chemistry.

Purpose of the Study:

  • To develop a causal model for rotational isomerism in haloacetaldehydes using quantitative molecular orbital theory.
  • To analyze the influence of Pauli repulsion, orbital interactions, and electrostatic forces on molecular conformations.

Main Methods:

  • Relativistic density functional theory (DFT) calculations were employed.
  • Analysis of rotational energy profiles for haloacetaldehydes (OHC-CH2X, X = F, Cl, Br, I).
  • Bonding analyses were performed to understand electronic structure differences.

Main Results:

  • Rotational energy profiles are governed by a combination of Pauli repulsion, orbital interactions (like hyperconjugation), and electrostatic effects.
  • Fluorine's unique behavior stems from its compact nature, influencing electrostatic contributions to conformational preference.
  • Heavier halogens (Cl, Br, I) exhibit different conformational preferences compared to fluorine due to their more diffuse electron clouds.

Conclusions:

  • A more accurate model for molecular conformation involves integrating Pauli repulsion, orbital interactions, and electrostatics.
  • The study highlights the distinct electronic properties of fluorine compared to heavier halogens in determining molecular structure.
  • Quantitative molecular orbital theory provides deeper insights into chemical phenomena than simplified models.