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Eliminating accidental deviations to minimize generalization error and maximize replicability: Applications in
Eric W Bridgeford1, Shangsi Wang1, Zeyi Wang1
1Johns Hopkins University, Baltimore, Maryland, United States of America.
Plos Computational Biology
|September 16, 2021
Summary
The scientific replicability crisis may be mitigated by a new statistic, discriminability. This measure quantifies sample similarity, optimizing experimental design to reduce measurement error and improve scientific discovery.
Area of Science:
- Scientific methodology
- Biostatistics
- Data science
Background:
- Replicability is crucial for scientific discovery and clinical utility.
- A significant replicability crisis is impacting scientific research.
- Current statistics struggle to differentiate measurement error from individual differences.
Purpose of the Study:
- To address the limitations of existing replicability statistics.
- To introduce a novel statistic, discriminability, for quantifying sample similarity.
- To demonstrate how optimizing discriminability can enhance experimental design and inference.
Main Methods:
- Proposed a novel statistic, discriminability, to quantify within-individual sample similarity.
- Evaluated discriminability across diverse data types (univariate, Gaussian, Euclidean, and non-Euclidean).
- Applied discriminability optimization to simulated and real-world datasets, including brain imaging and genomics.
Main Results:
- Existing statistics like intra-class correlation and fingerprinting inadequately distinguish accidental vs. systematic deviations.
- Discriminability effectively quantifies the degree of similarity among an individual's samples.
- Optimizing discriminability demonstrably improved performance in subsequent inference tasks across all tested datasets.
Conclusions:
- Discriminability offers a robust method for assessing and improving the reliability of scientific measurements.
- Optimizing experimental design for discriminability is a promising strategy to combat the replicability crisis.
- Reducing accidental measurement error through discriminability enhancement is key to advancing scientific rigor.
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