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Plasmid Stability Analysis with Open-Source Droplet Microfluidics
Published on: December 27, 2024
767
Evaluation of Plasmid Stability by Negative Selection in Gram-negative Bacteria
Damián Lobato Márquez1, Laura Molina García2
1Department of Medicine, Imperial College London, London, UK.
Bio-Protocol
|September 20, 2021
Summary
We developed a novel, sensitive method to measure plasmid stability. This assay eliminates plasmid-containing cells, enabling detection of highly stable plasmids previously below assay sensitivity.
Area of Science:
- Molecular Biology
- Genetics
- Biotechnology
Background:
- Plasmid stability is crucial for biotechnological applications.
- Current methods using antibiotic resistance are insensitive to highly stable plasmids.
Purpose of the Study:
- To develop a novel, highly sensitive assay for measuring plasmid stability.
- To overcome the limitations of existing positive selection assays.
Main Methods:
- Utilized an aph-parE cassette with a rhamnose-inducible promoter.
- Engineered bacteria to synthesize ParE toxin upon rhamnose induction, leading to cell death.
- Selected for plasmid-free cells after toxin-induced elimination.
Main Results:
- The novel assay successfully measures plasmid stability with high sensitivity.
- Demonstrated elimination of plasmid-containing cells using the rhamnose-inducible system.
- Confirmed plasmid absence using kanamycin resistance.
Conclusions:
- The developed assay provides a sensitive method for assessing plasmid stability.
- This technique is valuable for studying and engineering highly stable plasmids.
- The aph-parE system offers a robust tool for plasmid stability analysis.
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