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Updated: Oct 19, 2025

A Semi-Quantitative Drug Affinity Responsive Target Stability DARTS assay for studying Rapamycin/mTOR interaction
Published on: August 27, 2019
Dissecting the biology of mTORC1 beyond rapamycin
Guang Yang1, Deanne Francis1, James R Krycer1
1University of Sydney, School of life and Environmental Sciences, Charles Perkins Centre, Sydney, New South Wales 2006, Australia.
Abstract:
Rapamycin extends maximal life span and increases resistance to starvation in many organisms. The beneficial effects of rapamycin are thought to be mediated by its inhibitory effects on the mechanistic target of rapamycin complex 1 (mTORC1), although it only partially inhibits the kinase activity of mTORC1. Other mTOR kinase inhibitors have been developed, such as Torin-1, but these readily cross-react with mTORC2. Here, we report the distinct characteristics of a third-generation mTOR inhibitor called RapaLink1. We found that low doses of RapaLink1 inhibited the phosphorylation of all mTORC1 substrates tested, including those whose phosphorylation is sensitive or resistant to inhibition by rapamycin, without affecting mTORC2 activity even after prolonged treatment. Compared with rapamycin, RapaLink1 showed better efficacy for inhibiting mTORC1 and potently blocked cell proliferation and induced autophagy. Moreover, using RapaLink1, we demonstrated that mTORC1 and mTORC2 exerted differential effects on cell glycolysis and glucose uptake. Last, we found that RapaLink1 and rapamycin had opposing effects on starvation resistance in Drosophila. Consistent with the effects of RapaLink1, genetic blockade of mTORC1 activity made flies more sensitive to starvation, reflecting the complexity of the mTORC1 network that extends beyond effects that can be inhibited by rapamycin. These findings extend our understanding of mTOR biology and provide insights into some of the beneficial effects of rapamycin.
Insights
A new drug, RapaLink1, effectively inhibits mTORC1, impacting cell growth and autophagy. This mTORC1 inhibitor shows distinct effects from rapamycin, revealing complexities in cellular nutrient sensing and lifespan regulation.
Area of Science:
- Biochemistry
- Cell Biology
- Aging Research
Background:
- Rapamycin extends lifespan by inhibiting mechanistic target of rapamycin complex 1 (mTORC1), but its inhibitory effects are partial.
- Existing mTOR kinase inhibitors like Torin-1 can affect mTORC2, limiting their specificity.
- Understanding precise mTORC1 regulation is crucial for elucidating aging and metabolic processes.
Purpose of the Study:
- To characterize a novel, third-generation mTOR inhibitor, RapaLink1, with high specificity for mTORC1.
- To compare the efficacy of RapaLink1 with rapamycin in inhibiting mTORC1 activity and its downstream effects.
- To investigate the distinct roles of mTORC1 and mTORC2 in cellular metabolism and organismal stress resistance.
Main Methods:
- Utilized RapaLink1, a selective mTORC1 inhibitor, across various cellular and organismal models.
- Assessed mTORC1 substrate phosphorylation, cell proliferation, autophagy induction, and glucose metabolism.
- Examined starvation resistance in *Drosophila* following RapaLink1 treatment and genetic mTORC1 inhibition.
Main Results:
- RapaLink1 potently inhibited all tested mTORC1 substrates at low doses without affecting mTORC2 activity.
- RapaLink1 demonstrated superior mTORC1 inhibition compared to rapamycin, blocking cell proliferation and inducing autophagy.
- Differential effects of mTORC1 and mTORC2 on glycolysis and glucose uptake were observed.
- RapaLink1 and rapamycin exhibited opposing effects on starvation resistance in *Drosophila*.
Conclusions:
- RapaLink1 is a highly specific and potent inhibitor of mTORC1, offering advantages over existing drugs.
- mTORC1 and mTORC2 play distinct roles in cellular glycolysis and glucose metabolism.
- The complexity of mTORC1 signaling extends beyond rapamycin's inhibitory capacity, impacting organismal responses to stress and longevity.
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