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Related Concept Videos

Solvating Effects02:12

Solvating Effects

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An understanding of the solvating effect helps rationalize the relation between solvation and acidity of the compound. In addition, this also explains the relative stability of conjugate bases for compounds with different pKa values. This lesson details, in-depth, the principle of solvating effects. The strength of an acid and the stability of its corresponding conjugate base are determined using pKa values. This observed relationship is a consequence of solvation, which is the interaction...
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Nucleophiles02:30

Nucleophiles

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The word “nucleophile” has a Greek root and translates to nucleus-loving. Nucleophiles are either negatively charged or neutral species with a pair of electrons in a high-energy occupied molecular orbital (HOMO). As these species tend to donate electron pairs, nucleophiles are considered Lewis bases as well. Negatively charged species, like OH−, Cl−, or HS−, with one or several pairs of electrons, are typically nucleophiles. Similarly, neutral species such as...
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Predicting Products: SN1 vs. SN202:27

Predicting Products: SN1 vs. SN2

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Nucleophilic substitution reactions of alkyl halides can proceed via an SN1 or an SN2 mechanism. While in SN2 reactions, the nucleophile attacks the substrate simultaneously as the leaving group departs, in SN1 reactions, the substrate first dissociates to give the carbocation intermediate. Various factors such as the structure of the substrate, the strength of the nucleophile, and the nature of the solvent promote one mechanism over the other.
With increased substitution on the alkyl halide,...
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Basicity of Heterocyclic Aromatic Amines01:25

Basicity of Heterocyclic Aromatic Amines

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Heterocyclic amines, where the N atom is a part of an alicyclic system, are similar in basicity to alkylamines. Interestingly, the heterocyclic amine having a nitrogen atom as part of an aromatic ring has much less basicity than its corresponding alicyclic counterpart. For this reason, as presented in Figure 1, piperidine (pKb = 2.8) is significantly more basic than pyridine (pKb = 8.8).
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Leveling Effect and Non-Aqueous Acid-Base Solutions02:11

Leveling Effect and Non-Aqueous Acid-Base Solutions

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This lesson defines the leveling effect in acidic and basic solutions and its role in aqueous and non-aqueous solutions. It is essential to understand the competing nature of various species in a chemical system.
The Leveling Effect of a Solvent
A generic acid (HA) reacts with the generic base (B-) to yield the corresponding conjugate base (A-) and conjugate acid (HB):
8.8K
Leveling Effect01:29

Leveling Effect

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In acid-base chemistry, the leveling effect refers to the limitation imposed by the solvent on the strength of acids and bases in solution. When a base stronger than the solvent's conjugate base is used, it deprotonates the solvent until the base is entirely consumed, making it ineffective against weaker acids. Conversely, an acid stronger than the solvent's conjugate acid protonates the solvent until the acid is depleted, rendering it ineffective against weaker bases. Essentially, the...
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Unraveling Entropic Rate Acceleration Induced by Solvent Dynamics in Membrane Enzymes
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Predicting Solvent-Dependent Nucleophilicity Parameter with a Causal Structure Property Relationship.

Samuel Boobier1, Yufeng Liu1, Krishna Sharma1

  • 1Institute of Process Research & Development, School of Chemistry, University of Leeds, Leeds, LS2 9JT, United Kingdom.

Journal of Chemical Information and Modeling
|September 22, 2021
PubMed
Summary
This summary is machine-generated.

Machine learning accurately predicts nucleophilicity (N) in common solvents, aiding sustainable chemistry. This approach uses Causal Structure Property Relationships (CSPR) for reliable reactivity predictions.

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Area of Science:

  • Synthetic chemistry
  • Computational chemistry
  • Machine learning applications

Background:

  • Solvent-dependent reactivity is crucial for controlling reaction selectivity in chemical synthesis.
  • There is a growing need for predictive models of reactivity in various solvents, especially sustainable ones.

Purpose of the Study:

  • To develop accurate machine learning models for predicting the nucleophilicity parameter (N).
  • To investigate the influence of solvent properties and nucleophile descriptors on reactivity predictions.
  • To explore the efficiency of different computational methods.

Main Methods:

  • Utilized a Causal Structure Property Relationship (CSPR) approach.
  • Employed machine learning (Extra Trees algorithm) for prediction.
  • Represented nucleophiles with electronic and steric descriptors, and solvents using PCA descriptors from the ACS Solvent Tool.
  • Compared DFT descriptors with faster PM6 descriptors.

Main Results:

  • Achieved excellent prediction of the nucleophilicity parameter (N) with R² = 0.93.
  • 81.6% of predictions were within ±2.0 of experimental values.
  • Identified solvent-dependent HOMO energy and Hirshfeld charge as key descriptors.
  • PM6 descriptors reduced computation time by 8.7-fold with a minor decrease in prediction accuracy.

Conclusions:

  • Machine learning models can reliably predict nucleophilicity across different solvents.
  • CSPR provides insights into the physicochemical relationships governing reactivity.
  • The study supports the use of efficient computational methods for reactivity prediction in sustainable chemistry.