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Workflow and Tools for Crystallographic Fragment Screening at the Helmholtz-Zentrum Berlin
Published on: March 3, 2021
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KRAS G12C fragment screening renders new binding pockets.
Magali Mathieu1, Valérie Steier1, Florence Fassy1
1Integrated Drug Discovery, Quai Jules Guesde, Vitry Sur Seine Cedex, France.
Small Gtpases
|September 24, 2021
Summary
Researchers discovered new binding sites on the KRAS G12C protein, a key driver in many cancers. These findings from fragment screening could lead to novel KRAS G12C-targeted cancer therapies.
Area of Science:
- Oncology
- Molecular Biology
- Drug Discovery
Background:
- KRAS genes are frequently mutated oncogenes in various cancers, with the G12C mutation contributing significantly to cancer mortality.
- Despite decades of research and drug development efforts targeting KRAS, no KRAS-specific drugs have been approved until recently.
- Emerging covalent inhibitors like MRTX849 and Sotorasib target the KRAS G12C mutation by binding to Cysteine 12.
Purpose of the Study:
- To identify novel binding pockets on the KRAS G12C protein surface.
- To explore new therapeutic strategies for KRAS G12C-driven cancers through fragment screening.
Main Methods:
- Conducted two fragment screening drug discovery campaigns.
- One campaign focused on identifying non-covalent binders to KRAS G12C.
- The other campaign focused on identifying covalent binders to KRAS G12C.
Main Results:
- Identified previously undescribed binding pockets on the KRAS G12C protein surface.
- The fragment screening campaigns yielded insights into potential new drug targets on KRAS G12C.
- These new pockets offer alternative sites for therapeutic intervention beyond the Switch II pocket.
Conclusions:
- The identification of novel binding pockets on KRAS G12C presents new opportunities for drug development.
- Fragment screening provides a valuable approach for discovering new therapeutic strategies against KRAS G12C.
- These findings could pave the way for more effective treatments for lung, colorectal, and pancreatic cancers harboring the KRAS G12C mutation.

