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Oral Biofilm Sampling for Microbiome Analysis in Healthy Children
Published on: December 31, 2017
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Individuals with substance use disorders have a distinct oral microbiome pattern
Tomasz Kosciolek1,2, Teresa A Victor3, Rayus Kuplicki3
1Department of Pediatrics, University of California San Diego, La Jolla, CA, USA.
Brain, Behavior, & Immunity - Health
|September 30, 2021
Summary
The oral microbiome differs between individuals with substance use disorder (SUD) and healthy controls. These oral microbiome patterns can accurately identify individuals with SUD, suggesting a potential biomarker for the condition.
Area of Science:
- Microbiome research
- Neuroscience
- Addiction science
Background:
- Substance use disorder (SUD) arises from complex genetic and environmental interactions.
- The human microbiome, particularly the oral microbiome, is increasingly recognized for its role in brain health.
- Oral microbiome composition is influenced by lifestyle, diet, and hygiene.
Purpose of the Study:
- To investigate differences in oral microbiome patterns between individuals with SUD and healthy comparison (HC) subjects.
- To determine if oral microbiome patterns can accurately distinguish between SUD and HC groups.
- To explore the relationship between oral microbiome diversity and negative reinforcement in SUD.
Main Methods:
- Analysis of a sub-sample (N=177) from the Tulsa 1000 project.
- 16S rRNA marker gene sequencing to characterize oral microbiomes of 123 SUD and 54 HC subjects.
- Machine learning approach combining microbiome features and socio-demographic variables for group classification.
Main Results:
- Significant differences in oral microbiome beta diversity (UniFrac distance) between SUD and HC groups.
- Machine learning models achieved 87%-92% accuracy in categorizing group membership, controlling for external factors.
- Lower oral microbiome diversity in SUD individuals correlated with higher negative reinforcement experiences.
Conclusions:
- Oral microbiome features effectively differentiate individuals with SUD from HC subjects.
- An impoverished oral microbiome may be associated with SUD driven by negative reinforcement.
- The oral microbiome shows potential as a biological marker for SUD risk or severity.
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