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Spread of Mink SARS-CoV-2 Variants in Humans: A Model of Sarbecovirus Interspecies Evolution
Christian A Devaux1,2,3, Lucile Pinault1, Jérémy Delerce1
1Aix-Marseille Université, IRD, APHM, MEPHI, IHU-Méditerranée Infection, Marseille, France.
Abstract:
The rapid spread of SARS-CoV-2 variants has quickly spanned doubts and the fear about their ability escape vaccine protection. Some of these variants initially identified in caged were also found in humans. The claim that these variants exhibited lower susceptibility to antibody neutralization led to the slaughter of 17 million minks in Denmark. SARS-CoV-2 prevalence tests led to the discovery of infected farmed minks worldwide. In this study, we revisit the issue of the circulation of SARS-CoV-2 variants in minks as a model of sarbecovirus interspecies evolution by: (1) comparing human and mink angiotensin I converting enzyme 2 (ACE2) and neuropilin 1 (NRP-1) receptors; (2) comparing SARS-CoV-2 sequences from humans and minks; (3) analyzing the impact of mutations on the 3D structure of the spike protein; and (4) predicting linear epitope targets for immune response. Mink-selected SARS-CoV-2 variants carrying the Y453F/D614G mutations display an increased affinity for human ACE2 and can escape neutralization by one monoclonal antibody. However, they are unlikely to lose most of the major epitopes predicted to be targets for neutralizing antibodies. We discuss the consequences of these results for the rational use of SARS-CoV-2 vaccines.
Insights
SARS-CoV-2 variants in minks show increased affinity for human ACE2, potentially impacting vaccine effectiveness. However, key antibody targets remain largely unaffected, suggesting continued vaccine utility.
Area of Science:
- Virology
- Molecular Biology
- Evolutionary Biology
Background:
- The emergence of SARS-CoV-2 variants raised concerns about vaccine escape.
- Mink-associated variants were found in humans, prompting investigations into their evolutionary dynamics.
Purpose of the Study:
- To investigate SARS-CoV-2 variant circulation in minks as a model for sarbecovirus interspecies evolution.
- To compare human and mink receptor interactions and analyze mutation impacts on the spike protein.
Main Methods:
- Comparative analysis of human and mink angiotensin I converting enzyme 2 (ACE2) and neuropilin 1 (NRP-1) receptors.
- Sequence comparison of SARS-CoV-2 from human and mink hosts.
- 3D structural analysis of spike protein mutations and prediction of linear epitopes.
Main Results:
- Mink-selected variants (Y453F/D614G) exhibit enhanced affinity for human ACE2.
- These variants show reduced susceptibility to neutralization by a specific monoclonal antibody.
- Major predicted neutralizing antibody epitopes are unlikely to be lost due to these mutations.
Conclusions:
- Mink-derived SARS-CoV-2 variants possess characteristics that could influence interspecies transmission and immune evasion.
- The findings support the continued rational use of SARS-CoV-2 vaccines while highlighting the need for ongoing surveillance.
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