Design and Synthesis of Hsp90 Inhibitors with B-Raf and PDHK1 Multi-Target Activity
Luca Pinzi1, Francesca Foschi2, Michael S Christodoulou2
1Department of Life Sciences, University of Modena and Reggio Emilia, Via G. Campi 103, 41125, Modena, Italy.
Abstract:
The design of multi-target ligands has become an innovative approach for the identification of effective therapeutic treatments against complex diseases, such as cancer. Recent studies have demonstrated that the combined inhibition of Hsp90 and B-Raf provides synergistic effects against several types of cancers. Moreover, it has been reported that PDHK1, which presents an ATP-binding pocket similar to that of Hsp90, plays an important role in tumor initiation, maintenance and progression, participating also to the senescence process induced by B-Raf oncogenic proteins. Based on these premises, the simultaneous inhibition of these targets may provide several benefits for the treatment of cancer. In this work, we set up a design strategy including the assembly and integration of molecular fragments known to be important for binding to the Hsp90, PDHK1 and B-Raf targets, aided by molecular docking for the selection of a set of compounds potentially able to exert Hsp90-B-Raf-PDHK1 multi-target activities. The designed compounds were synthesized and experimentally validated in vitro. According to the in vitro assays, compounds 4 a, 4 d and 4 e potently inhibited Hsp90 and moderately inhibited the PDHK1 kinase. Finally, molecular dynamics simulations were performed to provide further insights into the structural basis of their multi-target activity.
Insights
This study introduces novel multi-target ligands designed to inhibit Heat Shock Protein 90 (Hsp90), B-Raf, and Pyruvate Dehydrogenase Kinase 1 (PDHK1) simultaneously. These compounds show promise for cancer therapy by targeting key oncogenic pathways.
Area of Science:
- Medicinal Chemistry
- Molecular Biology
- Oncology
Background:
- Multi-target ligand design offers a promising strategy for treating complex diseases like cancer.
- Combined inhibition of Hsp90 and B-Raf has shown synergistic anti-cancer effects.
- PDHK1 plays a crucial role in tumor progression and senescence, with an ATP-binding pocket similar to Hsp90.
Purpose of the Study:
- To design and synthesize novel compounds targeting Hsp90, B-Raf, and PDHK1 simultaneously for cancer treatment.
- To explore the potential benefits of inhibiting these three targets concurrently.
Main Methods:
- Utilized molecular docking to assemble and integrate molecular fragments targeting Hsp90, PDHK1, and B-Raf.
- Synthesized a library of designed compounds.
- Performed in vitro assays to evaluate the inhibitory activity of the synthesized compounds.
- Conducted molecular dynamics simulations to understand the structural basis of the multi-target activity.
Main Results:
- Compounds 4a, 4d, and 4e demonstrated potent inhibition of Hsp90.
- These compounds also exhibited moderate inhibition of PDHK1 kinase.
- Molecular dynamics simulations provided insights into the structural mechanisms of their multi-target action.
Conclusions:
- The designed multi-target ligands show potential for cancer therapy by simultaneously inhibiting Hsp90 and PDHK1.
- This approach offers a novel strategy for developing more effective cancer treatments.
- Further research into these compounds could lead to new therapeutic interventions.
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