Related Experiment Video
Updated: Oct 16, 2025

12:00
A Practical Guide to Phylogenetics for Nonexperts
Published on: February 5, 2014
35.5K
Developmental graphs comparison strategy for analysis of pattern formation and phylogeny.
Oksana Butuzova1, Nikolay Pakudin2, Andrey Minarsky2
1BIN, St-Petersburg, Russia.
Journal of Theoretical Biology
|October 15, 2021
Summary
This study introduces a novel method using developmental graphs to formalize embryogenesis, revealing insights into the relationship between developmental trends and morphological evolution across plant taxa.
Area of Science:
- Developmental Biology
- Evolutionary Biology
- Phylogenetics
Background:
- Embryogenesis and final organism morphology are determined but lack clear phylogenetic correlation.
- Unrelated taxa can share similar early embryogenesis, while cleavage patterns vary within taxa.
Purpose of the Study:
- To develop a mathematical formalization of embryogenesis using developmental graphs.
- To create an algorithm for comparing these developmental graphs and clustering them.
- To analyze the relationship between developmental trends and morphological character evolution.
Main Methods:
- Construction of developmental graphs (trees) to model embryogenesis.
- Development of a specialized algorithm for comparing labeled developmental graphs.
- Calculation of distances between developmental trees for clustering.
- Analysis of cluster correspondence with morphological character inception.
Main Results:
- A methodology for mathematically formalizing and comparing embryogenesis processes.
- Clustering of developmental trees revealing relationships between different taxa.
- Identification of specific interrelations between developmental trends and morphological structures.
- Illustrative analysis on angiosperm species across various taxonomic ranks.
Conclusions:
- The proposed developmental graph approach provides a framework for understanding evolutionary patterns in embryogenesis.
- This method facilitates the analysis of how developmental processes influence morphological diversification.
- The findings offer new perspectives on the phylogenetic decoupling of early development and final form.
Related Concept Videos
Evolutionary Relationships through Genome Comparisons
6.5K
Genome comparison is one of the excellent ways to interpret the evolutionary relationships between organisms. The basic principle of genome comparison is that if two species share a common feature, it is likely encoded by the DNA sequence conserved between both species. The advent of genome sequencing technologies in the late 20th century enabled scientists to understand the concept of conservation of domains between species and helped them to deduce evolutionary relationships across diverse...
6.5K
Phylogenetic Trees
48.1K
Phylogenetic trees come in many forms. It matters in which sequence the organisms are arranged from the bottom to the top of the tree, but the branches can rotate at their nodes without altering the information. The lines connecting individual nodes can be straight, angled, or even curved.
48.1K
Phylogeny
54.6K
Phylogeny is concerned with the evolutionary diversification of organisms or groups of organisms. A group of organisms with a name is called a taxon (singular). Taxa (plural) can span different levels of the evolutionary hierarchy. For instance, the group containing all birds is a taxon (comprising the class Aves), and the group of all species of daisies (the genus Bellis) is a taxon. Phylogenies can likewise include just one genus (i.e., depict species relationships) or span an entire kingdom.
54.6K
Gene Evolution - Fast or Slow?
7.6K
The genomes of eukaryotes are punctuated by long stretches of sequence which do not code for proteins or RNAs. Although some of these regions do contain crucial regulatory sequences, the vast majority of this DNA serves no known function. Typically, these regions of the genome are the ones in which the fastest change, in evolutionary terms, is observed, because there is typically little to no selection pressure acting on these regions to preserve their sequences.
In contrast, regions which code...
In contrast, regions which code...
7.6K
Life Histories
20.9K
Overview
20.9K
Pedigree Analysis
86.1K
Overview
86.1K

