Related Experiment Video
Updated: Oct 16, 2025

Rapid PCR Thermocycling using Microscale Thermal Convection
Published on: March 5, 2011
Optimization and benchmarking of the thermal cycling algorithm
Amin Barzegar1,2, Anuj Kankani1, Salvatore Mandrà3,4
1Department of Physics and Astronomy, Texas A&M University, College Station, Texas 77843-4242, USA.
Abstract:
Optimization plays a significant role in many areas of science and technology. Most of the industrial optimization problems have inordinately complex structures that render finding their global minima a daunting task. Therefore, designing heuristics that can efficiently solve such problems is of utmost importance. In this paper we benchmark and improve the thermal cycling algorithm [Phys. Rev. Lett. 79, 4297 (1997)PRLTAO0031-900710.1103/PhysRevLett.79.4297] that is designed to overcome energy barriers in nonconvex optimization problems by temperature cycling of a pool of candidate solutions. We perform a comprehensive parameter tuning of the algorithm and demonstrate that it competes closely with other state-of-the-art algorithms such as parallel tempering with isoenergetic cluster moves, while overwhelmingly outperforming more simplistic heuristics such as simulated annealing.
More Related Videos
Related Concept Videos
Thermal expansion and Thermal stress: Problem Solving
To solve the problem, first, identify the known and unknown quantities. The initial length (L) of the bridge is 1275 m, the coefficient of linear expansion (α) for steel is 12 x 10-6/°C, and the change in...
Thermal Stress
Efficiency of The Carnot Cycle
Temperature and Thermal Equilibrium
The concept of temperature has evolved from the common concepts of hot and cold. The scientific definition of temperature explains more than just our sense of hot and cold. Temperature is operationally defined as the quantity measured with a thermometer. Furthermore, temperature is...

