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Updated: Oct 16, 2025

Optimization of a Multiplex RNA-based Expression Assay Using Breast Cancer Archival Material
Published on: August 1, 2018
mRNA coexpression patterns of Wnt pathway components and their clinicopathological associations in breast and
Alexandros Zougros1, Maria Michelli1, Ilenia Chatziandreou1
1First Department of Pathology, Medical School, National and Kapodistrian University of Athens, Mikras Asias 75, Goudi, Athens, Greece.
Abstract:
Aberrant Wnt signaling is implicated in carcinogenesis triggering efforts for the development of new therapeutic agents, many of which have entered clinical trials. We extend our previous analysis of WNT3, FZD7, LEF1 expression levels in breast and colorectal cancer including WNT2, FZD4 and β-catenin expression, in an effort to delineate their relative expression levels along with concurrent expression patterns and possible prognostic value. We analyzed 82 breast and 102 colorectal carcinomas for relative mRNA expression levels of the investigated genes by RT-PCR relative quantification with the ΔΔCt method. Statistical analysis was performed in order to determine associations of relative mRNA expression and linear correlations. β-catenin expression was determined by immunochemistry. Regarding breast carcinomas, decreased relative mRNA expression levels of WNT2, FZD4 were found frequently and WNT2 expression was correlated with ER/ PR status (p = 0.045/p = 0.028), whereas β-catenin with grade (p = 0.026). In colorectal carcinomas, increased relative mRNA expression levels of WNT2 and FZD4 were found in 59% and 32% of cases respectively, whereas β-catenin showed decreased mRNA expression levels in 57% of cases and a correlation with pN-category (p = 0.037). Linear correlations were observed between WNT2/FZD4 (R=0.542, p < 0.001), WNT2/β-catenin (R=0.254, p = 0.010), FZD4/β-catenin (R=0.406, p < 0.001) expression and a correlation between mRNA expression and membranous/cytoplasmic β-catenin emerged (p = 0.039/0.046). Our results suggest a possible clinical significance for Wnt pathway gene expression levels in both tumour types. The concurrent expression of the investigated genes as well as the different expression profiles, underlines the complexity of this pathway and the necessity of patient selection in order to maximize the efficacy of drugs targeting Wnt pathway.
Insights
Aberrant Wnt signaling is crucial in cancer. This study analyzed Wnt pathway gene expression in breast and colorectal cancers, revealing distinct patterns and potential prognostic value for targeted therapies.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Aberrant Wnt signaling is a known driver of carcinogenesis.
- Targeted therapies for Wnt signaling are under development and in clinical trials.
- Previous studies analyzed WNT3, FZD7, and LEF1 expression; this study expands the analysis.
Purpose of the Study:
- To investigate the relative mRNA expression levels of WNT2, FZD4, and β-catenin in breast and colorectal carcinomas.
- To determine concurrent expression patterns and potential prognostic value of these Wnt pathway genes.
- To explore correlations between gene expression and clinicopathological features.
Main Methods:
- Analysis of 82 breast and 102 colorectal carcinomas.
- Quantification of relative mRNA expression using RT-PCR and the ΔΔCt method.
- Immunohistochemistry was used to determine β-catenin expression.
Main Results:
- In breast cancer, decreased WNT2 and FZD4 mRNA levels were frequent; WNT2 correlated with ER/PR status, and β-catenin with grade.
- In colorectal cancer, increased WNT2 and FZD4 mRNA levels were observed in a significant portion of cases, while β-catenin showed decreased expression and correlated with pN-category.
- Significant linear correlations were found between WNT2/FZD4, WNT2/β-catenin, and FZD4/β-catenin expression, as well as between mRNA expression and β-catenin localization.
Conclusions:
- Wnt pathway gene expression levels may hold clinical significance in both breast and colorectal cancers.
- The complex and varied expression profiles highlight the pathway's intricacy.
- Patient selection is crucial for maximizing the efficacy of Wnt pathway-targeted drugs.
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