Joint Analysis of Genetic Correlation, Mendelian Randomization and Colocalization Highlights the Bi-Directional

Yanjun Wang1, Ping Guo1, Yanan Zhang1

  • 1Department of Biostatistics, School of Public Health, Cheeloo College of Medicine, Shandong University, Jinan, China.

Frontiers in Genetics
|October 21, 2021
PubMed

Insights

This study found a two-way causal link between hypothyroidism and primary biliary cirrhosis (PBC). Genetic analysis revealed shared architecture, suggesting these conditions influence each other, impacting prevention strategies.

Area of Science:

  • Genetics
  • Epidemiology
  • Gastroenterology

Background:

  • Hypothyroidism and primary biliary cirrhosis (PBC) frequently co-occur in observational studies.
  • The causal relationship between hypothyroidism and PBC remains uncertain.
  • Understanding this link is crucial for disease etiology and management.

Purpose of the Study:

  • To investigate the potential causal association between hypothyroidism and PBC.
  • To determine if the relationship is bidirectional.
  • To leverage genetic data for causal inference.

Main Methods:

  • Utilized genetic correlation analysis to assess shared genetic architecture.
  • Employed Mendelian randomization (MR) with inverse variance weighted (IVW) and other methods.
  • Conducted colocalization analysis to identify shared causal variants.
  • Performed sensitivity analyses to ensure robustness of findings.

Main Results:

  • Significant genetic correlation (0.117, p=0.006) found between hypothyroidism and PBC.
  • MR analysis indicated hypothyroidism increases PBC risk (OR 1.223, p=2.76e-3).
  • PBC was also found to causally increase hypothyroidism risk (OR 1.049, p=0.012).
  • Colocalization analysis confirmed shared causal variants, supporting bidirectional association.

Conclusions:

  • Evidence supports a bidirectional causal relationship between hypothyroidism and PBC.
  • Findings offer insights into the etiology of both conditions.
  • Results may inform targeted prevention and intervention strategies for hypothyroidism and PBC.

Related Concept Videos

Genetic Lingo01:11

Genetic Lingo

Overview
106.9K
Genome-wide Association Studies-GWAS01:11

Genome-wide Association Studies-GWAS

Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
14.7K
Pedigree Analysis01:35

Pedigree Analysis

Overview
86.1K
Synthesis and Regulation of Thyroid Hormones01:20

Synthesis and Regulation of Thyroid Hormones

Low blood levels of the thyroid hormones — triiodothyronine (T3) and thyroxine (T4) — signal the hypothalamus to release the thyrotropin-releasing hormone (TRH). TRH then reaches the pituitary gland and stimulates the release of thyroid-stimulating hormone(TSH) into the bloodstream.
Upon reaching the thyroid gland, TSH stimulates the follicular cells' active uptake of iodide ions from the blood. The ions diffuse to the apical surface of the cells and are oxidized to iodine. The...
5.6K
Epistasis Analysis01:09

Epistasis Analysis

Although Mendel chose seven unrelated traits in peas to study gene segregation, most traits involve multiple gene interactions that create a spectrum of phenotypes. When the interaction of various genes or alleles at different locations influences a phenotype, this is called epistasis. Epistasis often involves one gene masking or interfering with the expression of another (antagonistic epistasis). Epistasis often occurs when different genes are part of the same biochemical pathway. The...
5.4K
Autoimmune Disorders01:29

Autoimmune Disorders

Autoimmune diseases are a group of disorders in which the body's immune system mistakenly attacks its own cells, tissues, and organs. This results from an overactive immune response against substances and tissues normally present in the body. Let's delve into the concept and mechanism of autoimmune diseases from an immune system point of view, explore different causes and examples of such diseases, and discuss potential solutions.
Concept and Mechanism of Autoimmune Diseases
The immune...
861