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Updated: Oct 16, 2025

Using RNA-sequencing to Detect Novel Splice Variants Related to Drug Resistance in In Vitro Cancer Models
Published on: December 9, 2016
Impact of alternative splicing on mechanisms of resistance to anticancer drugs
Maria Reviejo1, Meraris Soto2, Elisa Lozano1
1Experimental Hepatology and Drug Targeting (HEVEPHARM), University of Salamanca, Institute for Biomedical Research of Salamanca (IBSAL), Salamanca 37007, Spain; Center for the Study of Liver and Gastrointestinal Diseases (CIBERehd), Carlos III National Institute of Health, Madrid 28029, Spain.
Abstract:
A shared characteristic of many tumors is the lack of response to anticancer drugs. Multiple mechanisms of pharmacoresistance (MPRs) are involved in permitting cancer cells to overcome the effect of these agents. Pharmacoresistance can be primary (intrinsic) or secondary (acquired), i.e., triggered or enhanced in response to the treatment. Moreover, MPRs usually result in the lack of sensitivity to several agents, which accounts for diverse multidrug-resistant (MDR) phenotypes. MPRs are based on the dynamic expression of more than one hundred genes, constituting the so-called resistome. Alternative splicing (AS) during pre-mRNA maturation results in changes affecting proteins involved in the resistome. The resulting splicing variants (SVs) reduce the efficacy of anticancer drugs by lowering the intracellular levels of active agents, altering molecular targets, enhancing both DNA repair ability and defensive mechanism of tumors, inducing changes in the balance between pro-survival and pro-apoptosis signals, modifying interactions with the tumor microenvironment, and favoring malignant phenotypic transitions. Reasons accounting for cancer-associated aberrant splicing include mutations that create or disrupt splicing sites or splicing enhancers or silencers, abnormal expression of splicing factors, and impaired signaling pathways affecting the activity of the splicing machinery. Here we have reviewed the impact of AS on MPR in cancer cells.
Insights
Alternative splicing (AS) generates splicing variants (SVs) that contribute to multiple mechanisms of pharmacoresistance (MPRs) in cancer. These variants impact drug efficacy by altering drug levels, targets, and cellular defense mechanisms.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Many tumors exhibit resistance to anticancer drugs, a phenomenon known as pharmacoresistance.
- Multiple mechanisms of pharmacoresistance (MPRs) enable cancer cells to evade drug effects, leading to treatment failure.
- Pharmacoresistance can be intrinsic or acquired, often resulting in multidrug-resistant (MDR) phenotypes.
Purpose of the Study:
- To review the impact of alternative splicing (AS) on multiple mechanisms of pharmacoresistance (MPRs) in cancer cells.
- To elucidate how splicing variants (SVs) contribute to cancer drug resistance.
- To explore the molecular underpinnings of AS-driven pharmacoresistance.
Main Methods:
- Literature review focusing on alternative splicing and cancer pharmacoresistance.
- Analysis of molecular mechanisms by which splicing variants affect drug response.
- Synthesis of information on genetic and signaling pathways influencing aberrant splicing in cancer.
Main Results:
- Alternative splicing (AS) generates diverse splicing variants (SVs) that are integral to the cancer resistome.
- SVs reduce anticancer drug efficacy by altering intracellular drug levels, modifying drug targets, and enhancing cellular defense mechanisms.
- Aberrant splicing in cancer is driven by mutations, altered splicing factor expression, and dysregulated signaling pathways.
Conclusions:
- Alternative splicing plays a significant role in mediating multiple mechanisms of pharmacoresistance in cancer.
- Splicing variants contribute to treatment failure by promoting drug resistance and enabling malignant progression.
- Targeting AS represents a potential strategy to overcome pharmacoresistance in cancer therapy.
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