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Updated: Oct 16, 2025

Detection of Toxin Translocation into the Host Cytosol by Surface Plasmon Resonance
Published on: January 3, 2012
Structural basis for selective modification of Rho and Ras GTPases by Clostridioides difficile toxin B
Zheng Liu1, Sicai Zhang2, Peng Chen1
1Department of Physiology and Biophysics, University of California, Irvine, Irvine, CA 92697, USA.
Abstract:
Toxin B (TcdB) is a primary cause of Clostridioides difficile infection (CDI). This toxin acts by glucosylating small GTPases in the Rho/Ras families, but the structural basis for TcdB recognition and selectivity of specific GTPase substrates remain unsolved. Here, we report the cocrystal structures of the glucosyltransferase domain (GTD) of two distinct TcdB variants in complex with human Cdc42 and R-Ras, respectively. These structures reveal a common structural mechanism by which TcdB recognizes Rho and R-Ras. Furthermore, we find selective clustering of adaptive residue changes in GTDs that determine their substrate preferences, which helps partition all known TcdB variants into two groups that display distinct specificities toward Rho or R-Ras. Mutations that selectively disrupt GTPases binding reduce the glucosyltransferase activity of the GTD and the toxicity of TcdB holotoxin. These findings establish the structural basis for TcdB recognition of small GTPases and reveal strategies for therapeutic interventions for CDI.
Insights
Toxin B, a cause of Clostridioides difficile infection (CDI), targets Rho GTPases. Structural studies reveal how Toxin B recognizes its targets, offering new strategies for CDI therapies.
Area of Science:
- Molecular biology
- Structural biology
- Microbiology
Background:
- Clostridioides difficile infection (CDI) is a significant healthcare concern, primarily caused by Toxin B (TcdB).
- TcdB functions by glucosylating small GTPases, but the precise structural mechanisms of substrate recognition and selectivity are not fully understood.
Purpose of the Study:
- To elucidate the structural basis of TcdB recognition and selectivity for its small GTPase substrates.
- To identify key residues and mechanisms governing TcdB substrate specificity.
Main Methods:
- Cocrystallization of the TcdB glucosyltransferase domain (GTD) with human Cdc42 and R-Ras.
- X-ray crystallography to determine the complex structures.
- Site-directed mutagenesis to investigate the role of specific residues.
Main Results:
- Determined cocrystal structures of TcdB GTD variants with Cdc42 and R-Ras, revealing a conserved recognition mechanism.
- Identified adaptive residue variations within GTDs that dictate substrate specificity, classifying TcdB variants into two distinct groups.
- Demonstrated that mutations disrupting GTPase binding reduce GTD activity and TcdB holotoxin toxicity.
Conclusions:
- Established the structural foundation for TcdB's interaction with Rho/Ras family GTPases.
- Uncovered how TcdB variants achieve distinct substrate specificities.
- Provided insights into potential therapeutic strategies targeting TcdB for CDI treatment.
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