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m6A Modified Short RNA Fragments Inhibit Cytoplasmic TLS/FUS Aggregation Induced by Hyperosmotic Stress
Ryoma Yoneda1, Naomi Ueda1, Riki Kurokawa1
1Division of Biomedical Sciences, Research Center for Genomic Medicine, Saitama Medical University, 1397-1 Yamane, Hidaka-shi, Saitama 350-1241, Japan.
Abstract:
Translocated in LipoSarcoma/Fused in Sarcoma (TLS/FUS) is a nuclear RNA binding protein whose mutations cause amyotrophic lateral sclerosis. TLS/FUS undergoes LLPS and forms membraneless particles with other proteins and nucleic acids. Interaction with RNA alters conformation of TLS/FUS, which affects binding with proteins, but the effect of m6A RNA modification on the TLS/FUS-RNA interaction remains elusive. Here, we investigated the binding specificity of TLS/FUS to m6A RNA fragments by RNA pull down assay, and elucidated that both wild type and ALS-related TLS/FUS mutants strongly bound to m6A modified RNAs. TLS/FUS formed cytoplasmic foci by treating hyperosmotic stress, but the cells transfected with m6A-modified RNAs had a smaller number of foci. Moreover, m6A-modified RNA transfection resulted in the cells obtaining higher resistance to the stress. In summary, we propose TLS/FUS as a novel candidate of m6A recognition protein, and m6A-modified RNA fragments diffuse cytoplasmic TLS/FUS foci and thereby enhance cell viability.
Insights
Translocated in Liposarcoma/Fused in Sarcoma (TLS/FUS) binds to m6A modified RNA, influencing its cellular localization and stress resistance. This suggests TLS/FUS is an m6A reader, with m6A RNA enhancing cell survival.
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- Translocated in Liposarcoma/Fused in Sarcoma (TLS/FUS) is an RNA-binding protein implicated in amyotrophic lateral sclerosis.
- TLS/FUS participates in liquid-liquid phase separation (LLPS) and forms membraneless organelles.
- The impact of m6A RNA modification on TLS/FUS-RNA interactions is not well understood.
Purpose of the Study:
- To investigate the binding specificity of TLS/FUS to m6A-modified RNAs.
- To determine the functional consequences of m6A RNA interaction with TLS/FUS under stress conditions.
Main Methods:
- RNA pull-down assays were used to assess TLS/FUS binding to m6A RNA fragments.
- Cellular localization of TLS/FUS and stress resistance were evaluated after transfection with m6A-modified RNAs.
Main Results:
- Both wild-type and ALS-mutant TLS/FUS proteins exhibit strong binding to m6A-modified RNAs.
- m6A-modified RNA transfection reduced TLS/FUS cytoplasmic foci formation under hyperosmotic stress.
- Cells transfected with m6A-modified RNAs showed increased resistance to hyperosmotic stress.
Conclusions:
- TLS/FUS is identified as a novel m6A RNA recognition protein.
- m6A-modified RNAs can diffuse TLS/FUS cytoplasmic foci, enhancing cellular viability under stress.
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