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Assaying Protein Kinase Activity with Radiolabeled ATP
Published on: May 26, 2017
ROR and RYK extracellular region structures suggest that receptor tyrosine kinases have distinct WNT-recognition
Fumin Shi1, Jeannine M Mendrola2, Joshua B Sheetz3
1Department of Biochemistry and Biophysics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA; Graduate Group in Biochemistry and Molecular Biophysics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA.
Abstract:
WNTs play key roles in development and disease, signaling through Frizzled (FZD) seven-pass transmembrane receptors and numerous co-receptors including ROR and RYK family receptor tyrosine kinases (RTKs). We describe crystal structures and WNT-binding characteristics of extracellular regions from the Drosophila ROR and RYK orthologs Nrk (neurospecific receptor tyrosine kinase) and Derailed-2 (Drl-2), which bind WNTs though a FZD-related cysteine-rich domain (CRD) and WNT-inhibitory factor (WIF) domain respectively. Our crystal structures suggest that neither Nrk nor Drl-2 can accommodate the acyl chain typically attached to WNTs. The Nrk CRD contains a deeply buried bound fatty acid, unlikely to be exchangeable. The Drl-2 WIF domain lacks the lipid-binding site seen in WIF-1. We also find that recombinant DWnt-5 can bind Drosophila ROR and RYK orthologs despite lacking an acyl chain. Alongside analyses of WNT/receptor interaction sites, our structures provide further insight into how WNTs may recruit RTK co-receptors into signaling complexes.
Insights
This study reveals that Drosophila ROR and RYK receptor tyrosine kinases (RTKs) can bind WNTs without their typical acyl chains. Structural analysis suggests these RTKs may not accommodate WNT lipid modifications, impacting signaling complex formation.
Area of Science:
- Molecular Biology
- Developmental Biology
- Structural Biology
Background:
- WNT proteins are crucial signaling molecules in development and disease.
- WNTs signal via Frizzled (FZD) receptors and co-receptors like ROR and RYK receptor tyrosine kinases (RTKs).
Purpose of the Study:
- To determine the structural basis of WNT binding to Drosophila ROR (Nrk) and RYK (Drl-2) orthologs.
- To investigate the role of WNT lipid modification in RTK co-receptor recruitment.
Main Methods:
- X-ray crystallography was used to determine the structures of Nrk and Drl-2 extracellular regions.
- WNT-binding assays were performed using recombinant proteins.
Main Results:
- Crystal structures of Nrk and Drl-2 revealed they likely cannot accommodate the typical WNT acyl chain.
- The Nrk cysteine-rich domain (CRD) has a buried fatty acid, and the Drl-2 WNT-inhibitory factor (WIF) domain lacks a lipid-binding site.
- Recombinant DWnt-5 bound Nrk and Drl-2 even without an acyl chain.
Conclusions:
- Drosophila ROR and RYK orthologs can bind WNTs lacking acyl chains, suggesting alternative binding mechanisms.
- Structural insights into WNT/RTK interactions provide a basis for understanding WNT signaling complex assembly.
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