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Updated: Oct 15, 2025

Exploring the Arginine Methylome by Nuclear Magnetic Resonance Spectroscopy
Published on: December 16, 2021
Naturally occurring cancer-associated mutations disrupt oligomerization and activity of protein arginine
Owen M Price1, Abhishek Thakur2, Ariana Ortolano1
1Department of Chemistry and Biochemistry, Utah State University, Logan, Utah, USA.
Abstract:
Protein arginine methylation is a posttranslational modification catalyzed by the protein arginine methyltransferase (PRMT) enzyme family. Dysregulated protein arginine methylation is linked to cancer and a variety of other human diseases. PRMT1 is the predominant PRMT isoform in mammalian cells and acts in pathways regulating transcription, DNA repair, apoptosis, and cell proliferation. PRMT1 dimer formation, which is required for methyltransferase activity, is mediated by interactions between a structure called the dimerization arm on one monomer and a surface of the Rossman Fold of the other monomer. Given the link between PRMT1 dysregulation and disease and the link between PRMT1 dimerization and activity, we searched the Catalogue of Somatic Mutations in Cancer (COSMIC) database to identify potential inactivating mutations occurring in the PRMT1 dimerization arm. We identified three mutations that correspond to W215L, Y220N, and M224V substitutions in human PRMT1V2 (isoform 1) (W197L, Y202N, M206V in rat PRMT1V1). Using a combination of site-directed mutagenesis, analytical ultracentrifugation, native PAGE, and activity assays, we found that these conservative substitutions surprisingly disrupt oligomer formation and substantially impair both S-adenosyl-L-methionine (AdoMet) binding and methyltransferase activity. Molecular dynamics simulations suggest that these substitutions introduce novel interactions within the dimerization arm that lock it in a conformation not conducive to dimer formation. These findings provide a clear, if putative, rationale for the contribution of these mutations to impaired arginine methylation in cells and corresponding health consequences.
Insights
Mutations in the PRMT1 dimerization arm disrupt protein formation, impairing arginine methylation crucial for cellular functions. These findings link PRMT1 mutations to disease by affecting enzyme activity.
Area of Science:
- Biochemistry
- Molecular Biology
- Genetics
Background:
- Protein arginine methylation is a key posttranslational modification regulated by protein arginine methyltransferase (PRMT) enzymes.
- Dysregulation of protein arginine methylation is implicated in various human diseases, including cancer.
- PRMT1, the primary PRMT isoform, plays vital roles in transcription, DNA repair, apoptosis, and cell proliferation.
Purpose of the Study:
- To identify inactivating mutations in the PRMT1 dimerization arm using the Catalogue of Somatic Mutations in Cancer (COSMIC) database.
- To investigate the functional impact of identified mutations on PRMT1 dimer formation, S-adenosyl-L-methionine (AdoMet) binding, and methyltransferase activity.
Main Methods:
- Database search (COSMIC) for PRMT1 mutations.
- Site-directed mutagenesis to introduce specific mutations.
- Analytical ultracentrifugation and native PAGE to assess protein oligomerization.
- Enzyme activity assays to measure methyltransferase function.
- Molecular dynamics simulations to elucidate structural mechanisms.
Main Results:
- Three specific mutations (W215L, Y220N, M224V in human PRMT1V2) were identified in the PRMT1 dimerization arm.
- These mutations significantly disrupted PRMT1 oligomer formation.
- Impaired S-adenosyl-L-methionine (AdoMet) binding and reduced methyltransferase activity were observed.
- Molecular dynamics simulations indicated that mutations alter dimerization arm conformation, hindering dimer formation.
Conclusions:
- Identified PRMT1 mutations disrupt dimerization, leading to impaired arginine methylation.
- These findings provide a molecular rationale for the link between PRMT1 dysregulation and disease.
- Understanding these mutations' effects is crucial for comprehending cellular health consequences.
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