Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Clearance Models: Physiological Models01:09

Clearance Models: Physiological Models

144
Drug clearance is a critical pharmacokinetic process involving the irreversible removal of drugs from the body through various organs over a specified time period. Physiological models are indispensable in determining organ-specific clearance, defined by the proportion of the drug eliminated per unit of time from the organ's blood volume.
The organ's clearance rate depends on the blood flow to the organ and the extraction ratio (E). The extraction ratio describes the organ's...
144
Model Approaches for Pharmacokinetic Data: Physiological Models01:15

Model Approaches for Pharmacokinetic Data: Physiological Models

140
Physiological models in pharmacokinetics are instrumental in understanding the distribution and elimination of drugs within the body. These models describe the drug concentration within target organs, influenced by factors such as drug uptake, tissue volume, and blood flow. Drug uptake is governed by the partition coefficient, which signifies the drug concentration ratio in tissue to that in the blood. The blood flow rate to a specific tissue is expressed as Qt, and the rate of change in tissue...
140
Phylogeny01:23

Phylogeny

54.6K
Phylogeny is concerned with the evolutionary diversification of organisms or groups of organisms. A group of organisms with a name is called a taxon (singular). Taxa (plural) can span different levels of the evolutionary hierarchy. For instance, the group containing all birds is a taxon (comprising the class Aves), and the group of all species of daisies (the genus Bellis) is a taxon. Phylogenies can likewise include just one genus (i.e., depict species relationships) or span an entire kingdom.
54.6K
Prediction Intervals01:03

Prediction Intervals

2.5K
The interval estimate of any variable is known as the prediction interval. It helps decide if a point estimate is dependable.
However, the point estimate is most likely not the exact value of the population parameter, but close to it. After calculating point estimates, we construct interval estimates, called confidence intervals or prediction intervals. This prediction interval comprises a range of values unlike the point estimate and is a better predictor of the observed sample value, y. 
2.5K
Mechanistic Models: Compartment Models in Individual and Population Analysis01:23

Mechanistic Models: Compartment Models in Individual and Population Analysis

109
Mechanistic models are utilized in individual analysis using single-source data, but imperfections arise due to data collection errors, preventing perfect prediction of observed data. The mathematical equation involves known values (Xi), observed concentrations (Ci), measurement errors (εi), model parameters (ϕj), and the related function (ƒi) for i number of values. Different least-squares metrics quantify differences between predicted and observed values. The ordinary least...
109
Model Approaches for Pharmacokinetic Data: Distributed Parameter Models01:06

Model Approaches for Pharmacokinetic Data: Distributed Parameter Models

148
Pharmacokinetic models are mathematical constructs that represent and predict the time course of drug concentrations in the body, providing meaningful pharmacokinetic parameters. These models are categorized into compartment, physiological, and distributed parameter models.
The distributed parameter models are specifically designed to account for variations and differences in some drug classes. This model is particularly useful for assessing regional concentrations of anticancer or...
148

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

The Typical Body Segment: An Anatomy Teaching Paradigm Created by Matt Cartmill and Others While Teaching Gross Anatomy at Duke University.

American journal of biological anthropology·2026
Same author

Phylogenetic Influence on Bone Material Stiffness in the Mandibles of Cercopithecid Primates.

American journal of biological anthropology·2026
Same author

Dental Wear and Molar Pulp Volume Reduction in Macaca fascicularis.

American journal of biological anthropology·2025
Same author

Biomechanical and morphological determinants of maximal jumping performance in callitrichine monkeys.

The Journal of experimental biology·2024
Same author

Dental sculpting and compensatory shearing crests demonstrated in a WEAR series of Presbytis rubicunda (Cercopithecoidea, Colobidae) with dental topography analysis.

American journal of biological anthropology·2024
Same author

Dental topography of the Oligocene anthropoids Aegyptopithecus zeuxis and Apidium phiomense: Paleodietary insights from analysis of wear series.

Journal of human evolution·2023

Related Experiment Video

Updated: Oct 15, 2025

Using Phylogenetic Analysis to Investigate Eukaryotic Gene Origin
08:57

Using Phylogenetic Analysis to Investigate Eukaryotic Gene Origin

Published on: August 14, 2018

16.1K

Using BayesModelS to provide Bayesian- and phylogenetically-informed primate body mass predictions.

James D Pampush1, Edward J Fuselier2, Gabriel S Yapuncich3

  • 1Department of Exercise Science, High Point University, High Point, NC 27260, USA; Department of Physician Assistant Studies, High Point University, High Point, NC 27260, USA.

Journal of Human Evolution
|October 24, 2021
PubMed
Summary
This summary is machine-generated.

Paleontologists can better predict extinct animal body mass using phylogenetically informed Bayesian methods like BayesModelS. These advanced techniques, incorporating evolutionary relationships, offer superior accuracy compared to traditional statistical approaches for fossil body mass estimation.

Keywords:
AdapiformsFossil primatesIndependent contrastsInverse calibrationNotharctus

More Related Videos

A Practical Guide to Phylogenetics for Nonexperts
12:00

A Practical Guide to Phylogenetics for Nonexperts

Published on: February 5, 2014

35.5K
Creating and Applying a Reference to Facilitate the Discussion and Classification of Proteins in a Diverse Group
07:49

Creating and Applying a Reference to Facilitate the Discussion and Classification of Proteins in a Diverse Group

Published on: August 16, 2017

7.2K

Related Experiment Videos

Last Updated: Oct 15, 2025

Using Phylogenetic Analysis to Investigate Eukaryotic Gene Origin
08:57

Using Phylogenetic Analysis to Investigate Eukaryotic Gene Origin

Published on: August 14, 2018

16.1K
A Practical Guide to Phylogenetics for Nonexperts
12:00

A Practical Guide to Phylogenetics for Nonexperts

Published on: February 5, 2014

35.5K
Creating and Applying a Reference to Facilitate the Discussion and Classification of Proteins in a Diverse Group
07:49

Creating and Applying a Reference to Facilitate the Discussion and Classification of Proteins in a Diverse Group

Published on: August 16, 2017

7.2K

Area of Science:

  • Paleontology
  • Evolutionary Biology
  • Biostatistics

Background:

  • Accurate body mass prediction is crucial for reconstructing extinct species' ecology.
  • Paleontologists often estimate body mass from fossilized dental dimensions.
  • Traditional methods used frequentist statistics, with phylogenetic considerations being a recent addition.

Purpose of the Study:

  • To apply and evaluate BayesModelS, a phylogenetically informed Bayesian method, for predicting body mass in euarchontan species.
  • To compare the predictive accuracy of BayesModelS against ordinary least squares, phylogenetic generalized least squares, and phylogenetic independent contrasts (PICs).

Main Methods:

  • Applied BayesModelS to a dataset of 49 euarchontan species.
  • Utilized dental and postcranial variables for body mass prediction.
  • Compared prediction accuracy with ordinary least squares, phylogenetic generalized least squares, and PICs.

Main Results:

  • BayesModelS and PICs demonstrated substantially higher predictive accuracy than ordinary least squares and phylogenetic generalized least squares.
  • Improved performance was most notable when using dental proxies or when proxies exhibited high phylogenetic covariance.
  • BayesModelS and PIC methods produced less variance in predicted values across different body mass proxies for Notharctus tenebrosus.

Conclusions:

  • Phylogenetically informed methods, particularly BayesModelS and PICs, are more effective for predicting body mass in paleontological contexts.
  • These methods offer improved accuracy and reduced variance, especially with dental data.
  • The study provides scripts to facilitate the application of BayesModelS and PICs for paleontological research.