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Published on: May 31, 2024
DFT based QSAR study on quinolone-triazole derivatives as antibacterial agents
Niloofar Ghasedi1, Shahin Ahmadi2, Sepideh Ketabi2
1Department of Medicinal Chemistry, Faculty of Pharmacy, Tehran Medical Sciences, Islamic Azad University, Tehran, Iran.
Quantitative Structure-Activity Relationship (QSAR) models were developed for quinolone-triazole derivatives against Staphylococcus aureus and Pseudomonas aeruginosa. Key molecular descriptors were identified to predict and design new potent antibacterial agents.
Area of Science:
- Medicinal Chemistry
- Computational Chemistry
- Pharmacology
Background:
- Quinolone-triazole derivatives are investigated for their antibacterial properties.
- Understanding structure-activity relationships is crucial for drug discovery.
Purpose of the Study:
- To develop robust QSAR models for quinolone-triazole derivatives against Gram-positive (S. aureus) and Gram-negative (P. aeruginosa) bacteria.
- To identify key molecular descriptors that govern antibacterial activity.
- To design novel compounds with enhanced antibacterial efficacy.
Main Methods:
- Quantitative Structure-Activity Relationship (QSAR) modeling.
- Density Functional Theory (DFT) calculations for molecular optimization and descriptor extraction.
- Hierarchical cluster analysis for dataset division.
- Stepwise Multiple Linear Regression (MLR) for model development.
- Internal and external validation of QSAR models.
Main Results:
- Developed predictive QSAR models for S. aureus (R² = 0.889, R²ext = 0.938) and P. aeruginosa (R² = 0.957, R²ext = 0.923).
- Identified critical descriptors: partial atomic charges, bond length, 13C-NMR chemical shift for S. aureus; partial atomic charge, LUMO-HOMO energy gap, logP for P. aeruginosa.
- Designed and proposed new quinolone-triazole derivatives with potentially higher antibacterial activity.
Conclusions:
- QSAR modeling effectively predicts the antibacterial activity of quinolone-triazole derivatives.
- Specific molecular descriptors significantly influence activity against S. aureus and P. aeruginosa.
- The study provides a foundation for the rational design of novel antibacterial agents.
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