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Updated: Oct 15, 2025

Rapid Screening of HIV Reverse Transcriptase and Integrase Inhibitors
Published on: April 9, 2014
Emergence of Resistance in HIV-1 Integrase with Dolutegravir Treatment in a Pediatric Population from the IMPAACT
Cindy Vavro1, Theodore Ruel2, Andrew Wiznia3
1ViiV Healthcare, Research Triangle Park, North Carolina, USA.
Insights
Emergent integrase strand transfer inhibitor (INSTI) resistance, specifically G118R or R263K substitutions, was observed in children and adolescents with HIV-1 receiving dolutegravir. These mutations impact drug susceptibility and viral replication capacity.
Area of Science:
- Virology
- Pharmacology
- Pediatric Infectious Diseases
Background:
- The study investigates integrase strand transfer inhibitor (INSTI) resistance in pediatric HIV-1 patients.
- Dolutegravir is a key component of optimized background regimens for treatment-experienced children.
Purpose of the Study:
- To characterize the mechanisms of emergent INSTI resistance in pediatric participants receiving dolutegravir.
- To analyze the impact of specific resistance substitutions on dolutegravir susceptibility and viral replication capacity.
Main Methods:
- Multicenter, open-label, phase I/II study (P1093) involving pediatric participants (4 weeks to <18 years) with HIV-1.
- Population and clonal-level integrase genotyping and phenotyping at screening and virologic failure.
- Phylogenetic analysis and homology modeling of HIV-1 integrase complexes.
Main Results:
- Treatment-emergent INSTI resistance was detected in 8 participants meeting protocol-defined virologic failure criteria.
- The substitutions G118R or R263K were identified in 6 participants, with secondary substitutions also observed.
- G118R demonstrated a greater reduction in dolutegravir susceptibility and integrase replication capacity compared to R263K, especially with co-occurring mutations.
Conclusions:
- G118R and R263K are distinct INSTI resistance substitutions detected in pediatric patients with prior virologic failure on dolutegravir.
- Molecular and structural characterization aids in understanding INSTI resistance mechanisms in antiretroviral-experienced pediatric populations.
- These findings are crucial for managing HIV-1 treatment in children and adolescents.
Abstract:
P1093 is a multicenter, open-label, phase I/II study of pharmacokinetics, safety, and tolerability of dolutegravir plus an optimized background regimen in pediatric participants aged 4 weeks to <18 years with HIV-1. Most participants were highly treatment experienced. We report the mechanisms of emergent integrase strand transfer inhibitor (INSTI) resistance among adolescents and children receiving dolutegravir. Plasma was collected at screening and near protocol-defined virologic failure (PDVF) for population-level and, for some samples, clonal-level integrase genotyping, phenotyping, and replication capacity. HIV-1 RNA was assessed in all available plasma samples. Phylogenetic analysis of clonal integrase sequences and homology modeling of HIV-1 intasome complexes containing resistance-associated substitutions were performed. Treatment-emergent INSTI resistance was detected in 8 participants who met PDVF criteria. The rare INSTI resistance-associated substitution G118R or R263K developed in 6 participants. The on-study secondary integrase substitution E157Q or L74I was observed in 2 participants. G118R reduced dolutegravir susceptibility and integrase replication capacity more than R263K and demonstrated greater reduction in susceptibility and integrase replication capacity when present with specific secondary integrase substitutions, including L74M, T66I, and E138E/K. Continuing evolution after R263K acquisition led to reduced dolutegravir susceptibility and integrase replication capacity. Structural examination revealed potential mechanisms for G118R- and R263K-mediated INSTI resistance. G118R and R263K INSTI resistance substitutions, which are distinct to second-generation INSTIs, were detected in adolescents and children with prior virologic failure who received dolutegravir. This study provides additional molecular and structural characterization of integrase to aid in the understanding of INSTI resistance mechanisms in antiretroviral-experienced populations. (This study has been registered at ClinicalTrials.gov under identifier NCT01302847.).
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