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Wolbachia detection in Aedes aegypti using MALDI-TOF MS coupled to artificial intelligence
Antsa Rakotonirina1, Cédric Caruzzo2, Valentine Ballan1
1Institut Pasteur de Nouvelle-Calédonie, URE-Entomologie Médicale, 98845, Nouméa, New Caledonia.
Scientific Reports
|November 2, 2021
Summary
Matrix-Assisted Laser Desorption Ionization-Time Of Flight (MALDI-TOF) combined with Convolutional Neural Networks (CNN) accurately detects Wolbachia in Aedes aegypti mosquitoes. This method is efficient for monitoring mosquito control programs.
Area of Science:
- Medical Entomology
- Molecular Biology
- Bioinformatics
Background:
- Aedes aegypti mosquitoes transmit arboviruses like dengue, Zika, and chikungunya.
- Insecticide resistance complicates Ae. aegypti control efforts.
- Releasing Wolbachia-infected mosquitoes is an emerging strategy to control arboviruses.
Purpose of the Study:
- To evaluate the reliability of MALDI-TOF MS coupled with CNN for detecting Wolbachia in field-collected Ae. aegypti.
- To compare the performance of this new method against existing techniques like LAMP and qPCR.
Main Methods:
- Analysis of laboratory-reared and field-collected Ae. aegypti using MALDI-TOF MS.
- Application of Convolutional Neural Network (CNN) machine learning models to spectral data.
- Comparison with Loop-Mediated Isothermal Amplification (LAMP) and quantitative Polymerase Chain Reaction (qPCR).
Main Results:
- CNN successfully recognized spectral patterns of Wolbachia infection in Ae. aegypti.
- MALDI-TOF MS and CNN achieved high accuracy (97%), specificity (99%), and sensitivity (93%) for Wolbachia detection.
- The combined method demonstrated superior efficiency compared to LAMP and comparable efficiency to qPCR.
Conclusions:
- MALDI-TOF MS coupled with CNN is a reliable and efficient method for detecting Wolbachia in Ae. aegypti.
- This approach offers a valuable tool for monitoring the prevalence of Wolbachia in field mosquito populations.
- It supports the effectiveness evaluation of Wolbachia-based arbovirus control programs.
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