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Discovery of a novel potentially transforming somatic mutation in CSF2RB gene in breast cancer
Mamoon Rashid1, Rizwan Ali2, Bader Almuzzaini3
1Department of Bioinformatics, King Abdullah International Medical Research Center (KAIMRC), King Saud bin Abdulaziz University for Health Sciences (KSAU-HS), MNGHA, Riyadh, Saudi Arabia.
Abstract:
The colony stimulating factor 2 receptor subunit beta (CSF2RB) is the common signaling subunit of the cytokine receptors for IL-3, IL-5, and GM-CSF. Several studies have shown that spontaneous and random mutants of CSF2RB can lead to ligand independence in vitro. To date, no report(s) have been shown for the presence of potentially transforming and oncogenic CSF2RB mutation(s) clinically in cancer patients until the first reported case of a leukemia patient in 2016 harboring a germline-activating mutation (R461C). We combined exome sequencing, pathway analyses, and functional assays to identify novel somatic mutations in KAIMRC1 cells and breast tumor specimen. The patient's peripheral blood mononuclear cell (PBMC) exome served as a germline control in the identification of somatic mutations. Here, we report the discovery of a novel potentially transforming and oncogenic somatic mutation (S230I) in the CSF2RB gene of a breast cancer patient and the cell line, KAIMRC1 established from her breast tumor tissue. KAIMRC1 cells are immortalized and shown to survive and proliferate in ligand starvation condition. Immunoblot analysis showed that mutant CSF2RB signals through JAK2/STAT and PI3K/mTOR pathways in ligand starvation conditions. Screening a small molecule kinase inhibitor library revealed potent JAK2 inhibitors against KAIMRC1 cells. We, for the first time, identified a somatic, potentially transforming, and oncogenic CSF2RB mutation (S230I) in breast cancer patients that seem to be an actionable mutation leading to the development of new therapeutics for breast cancer.
Insights
A novel, oncogenic somatic mutation (S230I) in the colony stimulating factor 2 receptor subunit beta (CSF2RB) gene was identified in breast cancer. This actionable CSF2RB mutation drives cancer cell proliferation and may be a therapeutic target.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- The colony stimulating factor 2 receptor subunit beta (CSF2RB) is crucial for cytokine signaling, and its mutations can cause ligand independence.
- While germline CSF2RB mutations have been linked to leukemia, oncogenic somatic CSF2RB mutations in breast cancer remain largely uncharacterized.
Purpose of the Study:
- To identify novel somatic mutations in CSF2RB in breast cancer.
- To investigate the functional and clinical significance of identified CSF2RB mutations in breast cancer.
Main Methods:
- Exome sequencing of breast tumor tissue and peripheral blood mononuclear cells (PBMCs) to identify somatic mutations.
- Functional assays and immunoblot analysis to assess the signaling pathways affected by mutant CSF2RB.
- Screening of small molecule kinase inhibitors against cancer cell lines harboring the mutation.
Main Results:
- A novel somatic mutation, S230I, in the CSF2RB gene was discovered in a breast cancer patient and the derived KAIMRC1 cell line.
- KAIMRC1 cells with the S230I mutation exhibit ligand-independent survival and proliferation, signaling through JAK2/STAT and PI3K/mTOR pathways.
- Potent JAK2 inhibitors were identified as effective against KAIMRC1 cells, indicating the mutation's actionable nature.
Conclusions:
- The study reports the first identification of a potentially transforming and oncogenic somatic CSF2RB mutation (S230I) in breast cancer.
- This mutation activates key oncogenic signaling pathways, making it a potential therapeutic target for breast cancer treatment.
- The findings highlight the actionable nature of the S230I CSF2RB mutation and suggest a new avenue for breast cancer therapy development.
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