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Isolation and Identification of Waterborne Antibiotic-Resistant Bacteria and Molecular Characterization of their Antibiotic Resistance Genes
Published on: March 3, 2023
Molecular characterization of NDM-1-producing Pseudomonas aeruginosa isolates from hospitalized patients in Iran
Mojtaba Shahin1,2, Ali Ahmadi3
1Molecular Biology Research Center, Systems Biology and Poisonings Institute, Baqiyatallah University of Medical Sciences, Tehran, Iran.
Background:
The emergence of carbapenem-resistant Pseudomonas aeruginosa is one of the most important challenges in a healthcare setting. The aim of this study is double-locus sequence typing (DLST) typing of blaNDM-1 positive P. aeruginosa isolates.
Methods:
Twenty-nine blaNDM-1 positive isolates were collected during three years of study from different cities in Iran. Modified hodge test (MHT), double-disk synergy test (DDST) and double-disk potentiation test (DDPT) was performed for detection of carbapenemase and metallo-beta-lactamase (MBL) producing blaNDM-1 positive P. aeruginosa isolates. The antibiotic resistance genes were considered by PCR method. Clonal relationship of blaNDM-1 positive was also characterized using DLST method.
Results:
Antibiotic susceptibility pattern showed that all isolates were resistant to imipenem and ertapenem. DDST and DDPT revealed that 15/29 (51.8%) and 26 (89.7%) of blaNDM-1 positive isolates were MBL producing isolates, respectively. The presence of blaOXA-10, blaVIM-2, blaIMP-1 and blaSPM genes were detected in 86.2%, 41.4%, 34.5% and 3.5% isolates, respectively. DLST typing results revealed the main cluster were DLST 25-11 with 13 infected or colonized patients.
Conclusions:
The presence of blaNDM-1 gene with other MBLs encoding genes in P. aeruginosa is a potential challenge in the treatment of microorganism infections. DLST showed partial diversity among 29 blaNDM-1 positive isolates.
Insights
Carbapenem-resistant Pseudomonas aeruginosa carrying the blaNDM-1 gene is a significant healthcare threat. Double-locus sequence typing revealed genetic diversity among these resistant isolates in Iran.
Area of Science:
- Medical Microbiology
- Infectious Diseases
- Genetics
Background:
- Carbapenem-resistant Pseudomonas aeruginosa (CRPA) poses a critical challenge in healthcare settings.
- The blaNDM-1 gene confers resistance to carbapenems, a last-resort antibiotic class.
- Understanding the genetic relatedness of CRPA is crucial for infection control.
Purpose of the Study:
- To perform double-locus sequence typing (DLST) on blaNDM-1 positive P. aeruginosa isolates.
- To characterize the genetic diversity and clonal relationships of these resistant strains.
- To investigate the co-occurrence of other carbapenemase and metallo-beta-lactamase (MBL) genes.
Main Methods:
- Collected 29 blaNDM-1 positive P. aeruginosa isolates from various Iranian cities over three years.
- Utilized Modified Hodge Test (MHT), Double-Disk Synergy Test (DDST), and Double-Disk Potentiation Test (DDPT) for carbapenemase and MBL detection.
- Employed Polymerase Chain Reaction (PCR) to identify specific antibiotic resistance genes and DLST for clonal analysis.
Main Results:
- All isolates exhibited resistance to imipenem and ertapenem.
- DDST and DDPT identified 51.8% and 89.7% of isolates as MBL producers, respectively.
- Detected blaOXA-10 (86.2%), blaVIM-2 (41.4%), blaIMP-1 (34.5%), and blaSPM (3.5%) genes; DLST identified a main cluster (DLST 25-11) involving 13 patients.
Conclusions:
- The co-existence of blaNDM-1 with other MBL genes in P. aeruginosa presents a significant therapeutic challenge.
- DLST analysis indicated partial genetic diversity among the studied blaNDM-1 positive P. aeruginosa isolates.
- These findings highlight the importance of molecular typing for tracking and controlling the spread of multidrug-resistant P. aeruginosa.
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