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Clinical Value and Potential Mechanisms of Oxysterol-Binding Protein Like 3 (OSBPL3) in Human Tumors
Na Hao1, Yudong Zhou1, Yijun Li1
1Department of Breast Surgery, First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Abstract:
Cancer remains one of the top culprits causing disease-related deaths. A lack of effective multi-cancer therapeutic targets has limited the prolongation of cancer patients' survival. Therefore, it is important to explore novel oncogenic genes or versatile targets and perform a comprehensive analysis to assess their roles in the process of tumorigenesis. OSBPL3 protein is an intracellular lipid receptor of the oxysterol-binding protein superfamily, which participates in some pathological and physiological processes in tumor progression. However, its clinical roles and potential mechanisms in cancers remain unknown. Thus, we aimed to systematic explore the potential oncogenic roles of OSBPL3 across thirty-three tumors using multiple web-based and publicly available tools, including the Cancer Genome Atlas, Gene Expression Omnibus, Genotype-Tissue Expression, cBioPortal, and Human Protein Atlas database. OSBPL3 is highly expressed in major subtypes of cancers, distinctly associated with the prognosis of tumor patients. We observed X676_splice/V676G alteration in the oxysterol domain and frequent mutations of OSBPL3 involve cell survival in skin cutaneous melanoma. We also first presented that the expression of OSBPL3 was associated with tumor mutational burden (TMB) in nine cancer types. Additionally, OSBPL3 shows an enhanced phosphorylation level at S426, S251, and S273 loci within the pleckstrin homology domain in multiple tumors, such as breast cancer or lung adenocarcinoma. And OSBPL3 expression was associated with active immune cells (CD8+ T cells) and cancer-associated fibroblasts in breast cancer, colon adenocarcinoma, and kidney renal clear cell carcinoma and immune checkpoint genes in more than 30 tumors, but weakly associated with immune suppressive cells (myeloid-derived suppressor cells, T regulatory cells). Moreover, protein processing and mRNA metabolic signaling pathways were involved in the functional mechanisms of OSBPL3. Our study first demonstrated that a novel agent OSBPL3 plays an important role in tumorigenesis from the perspective of publicly available databases and clinical tumor samples in various cancers, which comprehensively provide insights into its biological functions and may be helpful for further investigation.
Insights
The oxysterol-binding protein-like 3 (OSBPL3) gene is highly expressed in many cancers and linked to patient prognosis. OSBPL3 alterations and phosphorylation impact cell survival and immune responses, offering potential therapeutic targets.
Area of Science:
- Oncology
- Molecular Biology
- Genomics
- Bioinformatics
Background:
- Cancer is a leading cause of death, necessitating the identification of novel therapeutic targets.
- OSBPL3, an oxysterol-binding protein superfamily member, is implicated in tumor progression, but its clinical roles are unclear.
- Understanding OSBPL3's function in tumorigenesis is crucial for developing new cancer treatments.
Purpose of the Study:
- To systematically investigate the oncogenic roles of OSBPL3 across 33 cancer types.
- To analyze OSBPL3 expression, alterations, phosphorylation, and associations with tumor mutational burden and immune microenvironment.
- To explore the functional mechanisms of OSBPL3 in cancer development.
Main Methods:
- Utilized public databases: The Cancer Genome Atlas (TCGA), Gene Expression Omnibus (GEO), Genotype-Tissue Expression (GTEx), cBioPortal, and Human Protein Atlas.
- Analyzed OSBPL3 expression levels, genetic alterations (e.g., X676_splice/V676G), and phosphorylation sites (S426, S251, S273).
- Correlated OSBPL3 expression with tumor mutational burden (TMB), immune cell infiltration (CD8+ T cells, cancer-associated fibroblasts, MDSCs, Tregs), and immune checkpoint genes.
Main Results:
- OSBPL3 is highly expressed in numerous cancer subtypes and significantly associated with patient prognosis.
- Specific OSBPL3 alterations (X676_splice/V676G) and mutations were linked to cell survival in melanoma.
- OSBPL3 expression correlated with TMB in nine cancer types, showed enhanced phosphorylation in multiple tumors, and was associated with active immune cells and immune checkpoint genes across over 30 tumors.
Conclusions:
- OSBPL3 is a novel oncogenic factor with significant roles in tumorigenesis across various cancers.
- OSBPL3's involvement in cell survival, TMB, and immune modulation highlights its potential as a versatile cancer therapeutic target.
- This comprehensive analysis provides valuable insights into OSBPL3's biological functions and clinical implications in cancer.
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