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Updated: Oct 14, 2025

Nanomechanics of Drug-target Interactions and Antibacterial Resistance Detection
Published on: October 25, 2013
Daptomycin Resistance Occurs Predominantly in vanA-Type Vancomycin-Resistant Enterococcus faecium in Australasia and
Lucy Li1, Charlie Higgs1, Adrianna M Turner1
1Department of Microbiology and Immunology, Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Melbourne, VIC, Australia.
Abstract:
Healthcare associated infections caused by vancomycin-resistant Enterococcus faecium (VREfm) have a major impact on health outcomes. VREfm is difficult to treat because of intrinsic and acquired resistance to many clinically used antimicrobials, with daptomycin being one of the few last line therapeutic options for treating multidrug-resistant VREfm. The emergence of daptomycin-resistant VREfm is therefore of serious clinical concern. Despite this, the impact that daptomycin-resistant VREfm have on patient health outcomes is not clearly defined and knowledge on the mechanisms and genetic signatures linked with daptomycin resistance in VREfm remains incomplete. To address these knowledge gaps, phenotypic daptomycin susceptibility testing was undertaken on 324 E. faecium isolates from Australia and New Zealand. Approximately 15% of study isolates were phenotypically resistant to daptomycin. Whole genome sequencing revealed a strong association between vanA-VREfm and daptomycin resistance, with 95% of daptomycin-resistant study isolates harbouring vanA. Genomic analyses showed that daptomycin-resistant VREfm isolates were polyclonal and carried several previously characterised mutations in the liaR and liaS genes as well as several novel mutations within the rpoB, rpoC, and dltC genes. Overall, 70% of daptomycin-resistant study isolates were found to carry mutations within the liaR, rpoB, rpoC, or dltC genes. Finally, in a mouse model of VREfm bacteraemia, infection with the locally dominant daptomycin-resistant clone led to reduced daptomycin treatment efficacy in comparison to daptomycin-susceptible E. faecium. These findings have important implications for ongoing VREfm surveillance activities and the treatment of VREfm infections.
Insights
Daptomycin-resistant vancomycin-resistant Enterococcus faecium (VREfm) is a growing concern. This study identified genetic markers for resistance and demonstrated reduced daptomycin treatment efficacy in a mouse model.
Area of Science:
- Infectious Diseases
- Antimicrobial Resistance
- Genomics
Background:
- Healthcare-associated infections caused by vancomycin-resistant Enterococcus faecium (VREfm) pose significant clinical challenges.
- Daptomycin is a last-resort antibiotic for multidrug-resistant VREfm, making daptomycin resistance a serious clinical concern.
Purpose of the Study:
- To investigate the prevalence, genetic basis, and clinical impact of daptomycin resistance in VREfm isolates.
- To identify genetic signatures associated with daptomycin resistance in VREfm.
Main Methods:
- Phenotypic daptomycin susceptibility testing on 324 E. faecium isolates.
- Whole genome sequencing to identify genetic mutations and resistance mechanisms.
- Evaluation of daptomycin treatment efficacy in a mouse model of VREfm bacteremia.
Main Results:
- Approximately 15% of study isolates exhibited daptomycin resistance.
- A strong association was found between vanA-VREfm and daptomycin resistance (95% of resistant isolates harbored vanA).
- Novel mutations in liaR, liaS, rpoB, rpoC, and dltC genes were identified in daptomycin-resistant isolates, with 70% carrying mutations in liaR, rpoB, rpoC, or dltC.
- Daptomycin-resistant VREfm demonstrated reduced treatment efficacy in a mouse model.
Conclusions:
- The study identified key genetic determinants of daptomycin resistance in VREfm, including mutations in liaR, rpoB, rpoC, and dltC.
- Daptomycin resistance in VREfm impacts treatment efficacy, highlighting the need for enhanced surveillance and alternative therapeutic strategies.
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