Molecular basis of ubiquitin-specific protease 8 autoinhibition by the WW-like domain

Keijun Kakihara1,2, Kengo Asamizu1, Kei Moritsugu3

  • 1School of Life Science and Technology, Tokyo Institute of Technology, Yokohama, Japan.

Communications Biology
|November 9, 2021
PubMed

Insights

Ubiquitin-specific protease 8 (USP8) autoinhibition is mediated by a WW-like domain. This region

Area of Science:

  • Biochemistry
  • Molecular Biology
  • Cell Biology

Background:

  • Ubiquitin-specific protease 8 (USP8) regulates membrane trafficking.
  • USP8 activity is inhibited by 14-3-3 proteins.
  • USP8 mutations are linked to Cushing's disease.

Purpose of the Study:

  • To elucidate the molecular mechanism of USP8 autoinhibition.
  • To understand how 14-3-3 proteins regulate USP8 activity.
  • To investigate the structural basis of USP8 regulation.

Main Methods:

  • Pull-down assays
  • Single-molecule Förster Resonance Energy Transfer (smFRET)
  • In silico modeling

Main Results:

  • Amino acids 645-684 of USP8 identified as an autoinhibitory region.
  • This region forms a WW-like domain that obstructs the catalytic cleft.
  • 14-3-3 binding enhances the interaction between the WW-like and USP domains, inhibiting activity.

Conclusions:

  • The WW-like domain of USP8 mediates autoinhibition.
  • 14-3-3 proteins further inhibit USP8 by stabilizing this autoinhibitory interaction.
  • Dysregulation of this autoinhibition may contribute to Cushing's disease.

Related Concept Videos

Covalently Linked Protein Regulators02:04

Covalently Linked Protein Regulators

Proteins can undergo many types of post-translational modifications, often in response to changes in their environment. These modifications play an important role in the function and stability of these proteins. Covalently linked molecules include functional groups, such as methyl, acetyl, and phosphate groups, and also small proteins, such as ubiquitin. There are around 200 different types of covalent regulators that have been identified.
These groups modify specific amino acids in a protein....
7.8K
The Proteasome01:13

The Proteasome

Eukaryotic cells can degrade proteins through several pathways. One of the most important among these is the ubiquitin-proteasome pathway. It helps the cell eliminate the misfolded, damaged, or unwarranted cytoplasmic proteins in a highly specific manner.
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. This involves participation of a series of enzymes including— E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3...
1.2K
Regulated Protein Degradation02:58

Regulated Protein Degradation

It is vital to regulate the activity of enzymatic as well as non-enzymatic proteins inside the cell. This can be achieved either through creating a balance between their rate of synthesis and degradation or regulating the intrinsic activity of the protein. Both these regulation mechanisms play an essential role in the normal functioning of cells.
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...
7.9K
The Proteasome Structure01:17

The Proteasome Structure

The ubiquitin-proteasome pathway is a well-known mechanism utilized by eukaryotic cells to remove cytoplasmic proteins that are misfolded, damaged, or no longer needed. In this pathway, the protein that needs to be eliminated undergoes a process called ubiquitination, where a chain of ubiquitin molecules is attached to the 48th lysine residue of the target protein. This ubiquitin modification helps the proteasome distinguish between a target protein and a healthy protein.
The proteasome is an...
1.1K
Protein Complexes with Interchangeable Parts01:57

Protein Complexes with Interchangeable Parts

Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order...
2.6K
Export of Misfolded Proteins out of the ER01:32

Export of Misfolded Proteins out of the ER

After folding, the ER assesses the quality of secretory and membrane proteins. The correctly folded proteins are cleared by the calnexin cycle for transport to their final destination, while misfolded proteins are held back in the ER lumen. The ER chaperones attempt to unfold and refold the misfolded proteins but sometimes fail to achieve the correct native conformation. Such terminally misfolded proteins are then exported to the cytosol by ER-associated degradation or ERAD pathway for...
4.1K