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Published on: July 17, 2020
Phosphorylation-dependent BRD4 dimerization and implications for therapeutic inhibition of BET family proteins
Francesca Malvezzi1,2, Christopher J Stubbs1, Thomas A Jowitt3
1Structure, Biophysics and Fragment-Based Lead Generation, Discovery Sciences, BioPharmaceuticals R&D, AstraZeneca, Cambridge, UK.
Abstract:
Bromodomain-containing protein 4 (BRD4) is an epigenetic reader and oncology drug target that regulates gene transcription through binding to acetylated chromatin via bromodomains. Phosphorylation by casein kinase II (CK2) regulates BRD4 function, is necessary for active transcription and is involved in resistance to BRD4 drug inhibition in triple-negative breast cancer. Here, we provide the first biophysical analysis of BRD4 phospho-regulation. Using integrative structural biology, we show that phosphorylation by CK2 modulates the dimerization of human BRD4. We identify two conserved regions, a coiled-coil motif and the Basic-residue enriched Interaction Domain (BID), essential for the BRD4 structural rearrangement, which we term the phosphorylation-dependent dimerization domain (PDD). Finally, we demonstrate that bivalent inhibitors induce a conformational change within BRD4 dimers in vitro and in cancer cells. Our results enable the proposal of a model for BRD4 activation critical for the characterization of its protein-protein interaction network and for the development of more specific therapeutics.
Insights
Phosphorylation by CK2 regulates bromodomain-containing protein 4 (BRD4) dimerization, revealing a new target for cancer drug development. This structural insight into BRD4 function is key for improving oncology therapeutics.
Area of Science:
- Epigenetics
- Structural Biology
- Cancer Therapeutics
Background:
- Bromodomain-containing protein 4 (BRD4) is a key epigenetic regulator and oncology drug target.
- BRD4 function is modulated by phosphorylation, impacting gene transcription and drug resistance in cancers like triple-negative breast cancer.
Purpose of the Study:
- To perform the first biophysical analysis of BRD4 phospho-regulation.
- To elucidate the structural mechanisms underlying BRD4 function and its modulation by phosphorylation.
Main Methods:
- Integrative structural biology techniques.
- Biophysical analysis of BRD4 protein.
- In vitro and in cell-based assays.
Main Results:
- Phosphorylation by casein kinase II (CK2) modulates human BRD4 dimerization.
- Identified a phosphorylation-dependent dimerization domain (PDD) comprising a coiled-coil motif and the Basic-residue enriched Interaction Domain (BID).
- Bivalent inhibitors induce conformational changes in BRD4 dimers in vitro and in cancer cells.
Conclusions:
- A model for BRD4 activation based on phosphorylation-dependent dimerization is proposed.
- Findings are critical for understanding BRD4's protein-protein interaction network.
- Provides a basis for developing more specific BRD4-targeted cancer therapeutics.
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