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Related Concept Videos

Amines to Amides: Acylation of Amines01:19

Amines to Amides: Acylation of Amines

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Various carboxylic acid derivatives (such as acid chlorides, esters, and anhydrides) can be used for the acylation of amines to yield amides. The reaction requires two equivalents of amines. The first amine molecule functions as a nucleophile and attacks the carbonyl carbon to produce a tetrahedral intermediate. This is followed by the loss of the leaving group and restoration of the C=O bond.
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Amino Acid Catabolism01:18

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Microorganisms rely on proteins as an essential carbon and energy source, particularly in environments with limited polysaccharides or lipids. However, proteins are too large to cross the plasma membrane unaided, necessitating enzymatic degradation. Microbes secrete extracellular proteases and peptidases that hydrolyze proteins into peptides, which can then be transported across the membrane. Once inside the cell, intracellular proteases degrade these peptides into free amino acids, which...
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Preparation of Amides01:29

Preparation of Amides

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Amides are synthesized by treating carboxylic acids with amines in the presence of dehydrating agents like dicyclohexylcarbodiimide (DCC).
The DCC-promoted synthesis of amides begins with the protonation of DCC by carboxylic acid. The protonation makes it a better acceptor. Next, the addition of carboxylate to the protonated carbodiimide gives a reactive acylating agent.
Subsequently, the amine acts as a nucleophile that attacks the acylating agent to form a tetrahedral intermediate. In the...
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Preparation of Amines: Reductive Amination of Aldehydes and Ketones01:38

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Carbonyl compounds and primary amines undergo reductive amination first to produce imines, followed by secondary amines in the same reaction mixture, using selective reducing agents like sodium cyanoborohydride or sodium triacetoxyborohydride. Reductive amination produces different degrees of substitution of amines depending on the starting amine substrate.
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Enzymatic C-Terminal Protein Engineering with Amines.

Fabian B H Rehm1, Tristan J Tyler1, Kuok Yap1

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Summary

This study introduces a novel chemoenzymatic method for protein and peptide modification using an engineered transpeptidase. This approach enables efficient, site-specific labeling with diverse amines, overcoming limitations of previous methods.

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Area of Science:

  • Biochemistry
  • Chemical Biology
  • Protein Engineering

Background:

  • Chemoenzymatic modification enables homogeneous conjugate generation for diverse applications.
  • Existing transpeptidase methods face limitations including synthetic conjugate preparation, bulky tags, and low substrate turnover.

Purpose of the Study:

  • To develop a versatile peptide/protein labeling strategy using an engineered transpeptidase.
  • To overcome limitations of current transpeptidase-mediated ligation methods.

Main Methods:

  • Engineered a promiscuous transpeptidase for C-terminal asparagine labeling.
  • Utilized commercially available amines for irreversible incorporation.
  • Demonstrated applications including protein-drug conjugate preparation, C-to-C protein fusion, and dual-terminal protein labeling.

Main Results:

  • Achieved irreversible incorporation of diverse amines at C-terminal asparagine.
  • Successfully prepared a homogeneous protein-drug conjugate.
  • Generated a genetically inaccessible C-to-C protein fusion.
  • Demonstrated site-specific, sequential labeling at both protein termini.

Conclusions:

  • The engineered transpeptidase offers a powerful and versatile platform for chemoenzymatic protein and peptide modification.
  • This strategy expands the toolkit for creating defined protein conjugates and complex protein architectures.