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Published on: August 8, 2022
A combinatorial oligogenic basis for the phenotypic plasticity between late-onset dilated and arrhythmogenic
Kimia Pourebrahim1, John Garrity Marian2, Yanli Tan1
1Center for Cardiovascular Genetics, Institute of Molecular Medicine and Department of Medicine, University of Texas Health Sciences Center at Houston, Houston, TX 77030, USA.
Insights
Genetic variants in the TTN gene cause late-onset dilated cardiomyopathy (DCM) with age-dependent penetrance. Other genetic factors can modify this phenotype, potentially leading to arrhythmogenic right ventricular cardiomyopathy (ARVC).
Area of Science:
- Cardiovascular Genetics
- Molecular Cardiology
- Genomic Medicine
Background:
- Dilated cardiomyopathy (DCM) and arrhythmogenic right ventricular cardiomyopathy (ARVC) are distinct hereditary cardiomyopathies.
- These conditions are typically caused by pathogenic variants (PVs) in different gene sets.
- DCM involves left ventricular dysfunction, while ARVC affects the right ventricle with fibrofatty infiltration.
Purpose of the Study:
- To investigate the genetic underpinnings of variable cardiomyopathy presentations within a single family.
- To analyze the genetic basis of phenotypic heterogeneity in hereditary cardiomyopathies.
Main Methods:
- Whole-exome sequencing was performed on family members with varying clinical phenotypes.
- Clinical characterization and segregation analysis of identified variants were conducted.
- Analysis included pathogenic variants (PVs) and likely pathogenic variants (LPVs).
Main Results:
- A novel splicing and a rare missense variant in the TTN gene, likely in cis, co-segregated with the cardiomyopathy phenotype.
- These TTN variants were associated with late-onset DCM, conduction defects, and arrhythmias.
- LPVs in DSP and PKP2 (ARVC genes) were found in a family member with ARVC, alongside TTN variants, suggesting a modifying role.
Conclusions:
- TTN variants are causally linked to age-dependent penetrant, late-onset DCM.
- Concomitant LPVs in other genes can modify the cardiac phenotype, potentially causing a switch from DCM to ARVC.
- Hereditary cardiomyopathies may have an oligogenic basis, requiring comprehensive genetic analysis for understanding pathogenesis.
Introduction:
Primary dilated cardiomyopathy (DCM) and arrhythmogenic right ventricular cardiomyopathy (ARVC) are the two common and distinct forms of hereditary cardiomyopathies caused by defined pathogenic variants (PVs) typically in different sets of genes. DCM is characterized by left ventricular dilatation, dysfunction, and failure, whereas ARVC classically involves the right ventricle and is characterized by fibrofatty infiltration of the myocardium. DCM is caused primarily by the PVs in genes encoding sarcomere and cytoskeletal protein, while ARVC is mainly a disease of the desmosome proteins. DCM and ARVC exhibit partial phenotypic and genetic overlaps.
Aim:
To analyze the genetic basis of the phenotypic heterogeneity of cardiomyopathy in members of a single family.
Methods And Results:
We recruited, clinically characterized, and performed whole-exome sequencing in five affected, three probably affected, and two clinically unaffected members of a single family. The family members mainly exhibited late-onset DCM associated with conduction defects and arrhythmias. One family member who died suddenly was diagnosed with the classic ARVC at autopsy and another presented with isolated ventricular tachycardia. A novel splicing (truncating) and a rare missense variant in the TTN gene, likely in cis, co-segregated with the phenotype in all affected and probably affected family members and were likely the causal variants. Several PVs and LPVs in other genes involved in cardiomyopathies and arrhythmias were also identified that seem to modify the expression of the phenotype. Notably, LPVs in the DSP and PKP2 genes, which are known genes for ARVC, were identified in the family member who also carried the TTN variants but developed the classic ARVC.
Conclusion:
The findings indicate the causal role of the TTN variants, exhibiting an age-dependent penetrance in late-onset DCM, and highlight the potential modifying role of the concomitant LPVs in additional genes on the expression of the phenotype, including a phenotypic switch from the anticipated DCM to ARVC. The findings support an oligogenic basis of the cardiac phenotype in hereditary cardiomyopathies. A comprehensive genetic analysis involving all PVs and LPVs along with detailed phenotypic characterization is necessary to gain insights into the molecular pathogenesis of hereditary cardiomyopathies.
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