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A continuum membrane model can predict curvature sensing by helix insertion.

Yiben Fu1, Wade F Zeno2, Jeanne C Stachowiak3

  • 1T. C. Jenkins Department of Biophysics, The Johns Hopkins University, 3400 N. Charles St., Baltimore, Maryland 21218, USA. margaret.johnson@jhu.edu.

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Summary

Protein domains with amphipathic helices sense membrane curvature. A new model predicts how physical parameters like spontaneous curvature and area influence this binding, crucial for membrane remodeling.

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Area of Science:

  • Biophysics
  • Cell Biology
  • Structural Biology

Background:

  • Protein domains like ENTH and BAR utilize amphipathic helices for membrane curvature sensing.
  • Predicting how physical parameters of these domains control curvature sensing is complex due to local membrane deformations.

Purpose of the Study:

  • To develop and validate a deformable continuum model for predicting protein domain-induced membrane curvature sensing.
  • To establish an empirical expression relating membrane energy to physical properties and helix insertion parameters.

Main Methods:

  • Utilized a deformable continuum model incorporating membrane physical properties and helix insertion.
  • Validated the model against experimental data for ENTH and ArfGAP helices binding to vesicles and cylinders.
  • Numerically calculated membrane energies as a function of bending modulus, radius, spontaneous curvature, and inserted area.

Main Results:

  • Modeled helix insertion as a local change in spontaneous curvature (cins0), achieving excellent agreement with experimental energetics.
  • Demonstrated that helix insertion lowers energy on small, high-curvature vesicles but increases energy on larger vesicles by introducing strain.
  • Formulated an empirical expression accurately capturing membrane energies based on physical and insertion parameters.

Conclusions:

  • The developed model accurately predicts curvature sensing behavior of protein domains.
  • Physical parameters of protein domains and membrane properties dictate the energetics of helix binding to curved membranes.
  • This work provides a framework for understanding protein localization dynamics in membrane remodeling.