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Warped Bayesian linear regression for normative modelling of big data.

Charlotte J Fraza1, Richard Dinga2, Christian F Beckmann3

  • 1Donders Centre for Cognitive Neuroimaging, Donders Institute for Brain, Cognition and Behaviour, Radboud University, Kapittelweg 29, Nijmegen 6525 EN, the Netherlands; Department of Cognitive Neuroscience, Radboud University Medical Centre, Nijmegen, the Netherlands.

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Summary

This study introduces a new Bayesian linear regression framework to improve neuroimaging normative modeling. The method accurately handles non-Gaussian data and scales to large datasets, enhancing individual prediction accuracy.

Keywords:
Bayesian linear regressionBig dataMachine learningNormative modellingUK Biobank

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Area of Science:

  • Neuroimaging
  • Biostatistics
  • Computational Neuroscience

Background:

  • Normative modeling in neuroimaging predicts individual deviations from typical development.
  • Current methods like Gaussian process regression struggle to scale with large neuroimaging datasets.
  • Existing models often assume Gaussian distributions, leading to inaccuracies, especially in outer centiles.

Purpose of the Study:

  • To develop a scalable normative modeling framework for large neuroimaging cohorts.
  • To address the challenge of non-Gaussian predictive distributions in neuroimaging data.
  • To improve the accuracy of estimating individual deviations from normative trajectories.

Main Methods:

  • Introduced a novel framework using Bayesian linear regression with likelihood warping.
  • Applied the warped Bayesian linear regression (BLR) to neuroimaging-derived measures from the UK Biobank.
  • Evaluated computational scalability and accuracy for image-derived phenotypes and diffusion tensor imaging measures.

Main Results:

  • Demonstrated good computational scaling of the warped BLR method.
  • Showed improved accuracy for certain image-derived phenotypes and voxel-wise measures with non-normal residuals.
  • Confirmed the framework's ability to model non-Gaussian distributions effectively.

Conclusions:

  • The warped Bayesian linear regression offers enhanced computational scalability for neuroimaging normative modeling.
  • This framework flexibly incorporates non-linearity and non-Gaussianity, expanding applicability to diverse neuroimaging datasets.
  • The method improves the accuracy of normative modeling, particularly for estimating deviations in sparse outer centiles.