Comparison of EMC and CM methods for orienting diffraction images in single-particle imaging experiments
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Updated: Oct 12, 2025

Cryo-EM and Single-Particle Analysis with Scipion
Published on: May 29, 2021
1Institute for Solid State Physics and Optics, Wigner Research Centre for Physics, Konkoly Thege Miklós út 29-33, Budapest, H-1121, Hungary.
Abstract:
In single-particle imaging (SPI) experiments, diffraction patterns of identical particles are recorded. The particles are injected into the X-ray free-electron laser (XFEL) beam in random orientations. The crucial step of the data processing of SPI is finding the orientations of the recorded diffraction patterns in reciprocal space and reconstructing the 3D intensity distribution. Here, two orientation methods are compared: the expansion maximization compression (EMC) algorithm and the correlation maximization (CM) algorithm. To investigate the efficiency, reliability and accuracy of the methods at various XFEL pulse fluences, simulated diffraction patterns of biological molecules are used.

