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Tomosipo: fast, flexible, and convenient 3D tomography for complex scanning geometries in Python.

Allard A Hendriksen, Dirk Schut, Willem Jan Palenstijn

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    Summary

    Tomography software tomosipo enables reconstruction from complex acquisition geometries. This Python package offers concise representation, visualization, and computation for advanced imaging needs.

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    Area of Science:

    • Medical imaging
    • Computational imaging
    • Image reconstruction

    Background:

    • Tomography reconstructs object interiors from projection images.
    • Standard acquisition geometries (circular, helical) are common.
    • Complex geometries require specialized software.

    Purpose of the Study:

    • To introduce tomosipo, a Python package for complex tomography.
    • To provide concise representation, visualization, and computation for advanced geometries.
    • To address limitations of current software for non-standard acquisition paths.

    Main Methods:

    • Development of the tomosipo Python package.
    • Implementation of tools for representing complex acquisition geometries.
    • Demonstration using case studies.

    Main Results:

    • tomosipo offers a flexible and intuitive solution.
    • The package handles complex geometries effectively.
    • Case studies validate its power and flexibility.

    Conclusions:

    • tomosipo simplifies reconstruction for complex tomography.
    • The software enhances flexibility in advanced imaging.
    • It is a valuable tool for researchers and practitioners.