Soil bacteria protect fungi from phenazines by acting as toxin sponges

Kurt M Dahlstrom1, Dianne K Newman2

  • 1Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA.

Current Biology : CB
|November 23, 2021
PubMed

Insights

Bacteria can protect fungi from toxic phenazines by sequestering the compounds. This bacterial protection mechanism, involving Paraburkholderia edwinii, allows fungi to thrive in environments with high levels of phenazines.

Area of Science:

  • Microbiology
  • Mycology
  • Biochemistry

Background:

  • Fungi are sensitive to phenazines, toxic molecules produced by bacteria.
  • Fungi often coexist with phenazine-producing bacteria in various environments.
  • Bacterial partners may offer protection to fungi in phenazine-rich habitats.

Purpose of the Study:

  • To investigate the hypothesis that bacterial partners protect fungi from phenazine toxicity.
  • To discover and characterize novel bacterial species involved in fungal-bacterial mutualism.
  • To elucidate the mechanisms underlying fungal protection against phenazines.

Main Methods:

  • Co-isolation of fungal and bacterial species from soil samples.
  • Identification of a novel bacterial species, Paraburkholderia edwinii.
  • Phenazine-1-carboxylic acid (PCA) challenge assays with co-isolated partners.
  • Morphological and environmental analyses of P. edwinii in response to PCA.
  • Mutagenic screening of P. edwinii to identify key regulatory genes (e.g., HrcA).
  • Investigation of fungal acidification as a trigger for bacterial protective responses.

Main Results:

  • Discovery of Paraburkholderia edwinii, a novel bacterial species that protects a co-isolated Aspergillus fungus from phenazine-1-carboxylic acid (PCA).
  • P. edwinii sequesters PCA, acting as a "toxin sponge," and alters its morphology by forming aggregates within the fungal colony.
  • The fungal partner induces PCA sequestration by P. edwinii and creates an anoxic, reducing environment to mitigate PCA toxicity.
  • The protective mechanism in P. edwinii is regulated by the stress-inducible transcriptional repressor HrcA.
  • Fungal acidification was identified as a key stressor that triggers P. edwinii's protective response, mimicking the presence of the fungus.
  • This protective phenomenon is widespread among Paraburkholderia species and shows moderate specificity among bacterial and fungal partners, including pathogens.

Conclusions:

  • Bacterial sequestration of phenazines provides a crucial protective mechanism for fungi in environments where these toxins are prevalent.
  • The interaction between P. edwinii and its fungal partner demonstrates a novel form of microbial mutualism driven by chemical signaling and environmental modification.
  • The HrcA regulatory pathway in P. edwinii is central to its ability to sense and respond to fungal-associated stressors, leading to phenazine detoxification.
  • This study reveals a common strategy employed by fungi to inhabit phenazine-replete environments, with significant implications for understanding microbial community dynamics in diverse ecosystems, including plant and human infections.

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