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Deciphering the Structural Effects of Activating EGFR Somatic Mutations with Molecular Dynamics Simulation
Published on: May 20, 2020
Glycosylation promotes the cancer regulator EGFR-ErbB2 heterodimer formation - molecular dynamics study
Zahra Motamedi1, Hassan Rajabi-Maham1, Maryam Azimzadeh Irani2
1Faculty of Life Sciences and Biotechnology, Shahid Beheshti University, Post Code: 1983969411, Tehran, Iran.
Abstract:
ErbB family of receptor tyrosine kinases play significant roles in cellular differentiation and proliferation. Mutation or overexpression of these receptors leads to several cancers in humans. The family has four homologous members including EGFR, ErbB2, ErbB3, and ErbB4. From which all except the ErbB2 bind to growth factors via the extracellular domain to send signals to the cell. However, dimerization of the ErbB receptor occurs in extracellular, transmembrane, and intracellular domains. The ErbB receptors are known to form homodimers and heterodimers in the active form. Heterodimerization increases the variety of identified ligands and signaling pathways that can be activated by these receptors. Furthermore, glycosylation of the ErbB receptors has shown to be critical for their stability, ligand binding, and dimerization. Here, atomistic molecular dynamics simulations on the glycosylated and unglycosylated heterodimer showed that the EGFR-ErbB2 heterodimer is more stable in its dynamical pattern compared to the EGFR-EGFR homodimer. This increased stability is regulated by maintaining the dimeric interface by the attached glycans. It was also shown that the presence of various glycosylation sites within the ErbB2 growth factor binding site leads to occlusion of this site by the glycans that inhibit ligand binding to ErbB2 and participate in further stabilization of the heterodimer construct. Putting together, glycosylation seems to promote the heterodimer formation within the ErbB family members as the dominant molecular mechanism of activation for these receptors.
Insights
Glycosylation stabilizes ErbB receptor heterodimers, crucial for cancer-related cell signaling. This molecular mechanism enhances receptor stability and influences ligand binding, impacting cell proliferation and differentiation.
Area of Science:
- Molecular Biology
- Biochemistry
- Cell Signaling
Background:
- The ErbB family of receptor tyrosine kinases (EGFR, ErbB2, ErbB3, ErbB4) are critical regulators of cellular processes.
- Aberrant ErbB signaling, due to mutations or overexpression, is implicated in human cancers.
- ErbB receptors form homodimers and heterodimers, influencing downstream signaling pathways.
Purpose of the Study:
- To investigate the role of glycosylation in the stability and function of ErbB receptor dimers.
- To elucidate the molecular mechanisms by which glycosylation affects EGFR-ErbB2 heterodimer formation and stability.
Main Methods:
- Atomistic molecular dynamics simulations were employed to compare glycosylated and unglycosylated EGFR-ErbB2 heterodimers and EGFR-EGFR homodimers.
- Analysis focused on the stability, dimerization interfaces, and ligand-binding site accessibility.
Main Results:
- The EGFR-ErbB2 heterodimer exhibits enhanced dynamical stability compared to the EGFR-EGFR homodimer.
- Attached glycans stabilize the dimeric interface of the EGFR-ErbB2 heterodimer.
- Glycosylation at specific sites within the ErbB2 binding pocket can occlude ligand access, further stabilizing the heterodimer.
Conclusions:
- Glycosylation plays a critical role in promoting ErbB family heterodimer formation.
- This glycosylation-mediated heterodimerization is a key molecular mechanism driving ErbB receptor activation.
- Understanding these interactions could offer new therapeutic strategies for ErbB-driven cancers.
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