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Drug Resistance Profile and Clinical Features for Hepatitis C Patients Experiencing DAA Failure in Taiwan
Chun-Ming Hong1, You-Yu Lin2, Chun-Jen Liu2,3
1Division of Hospital Medicine, Department of Internal Medicine, National Taiwan University Hospital, Taipei 10022, Taiwan.
Insights
Hepatitis C treatment failures in Taiwan were due to poor adherence and specific drug resistance mutations. Some cases may be reinfections, highlighting unique resistance profiles in Taiwan.
Area of Science:
- Hepatology
- Virology
- Pharmacogenomics
Background:
- Taiwan faces a significant burden of chronic hepatitis C, with 4% seropositive for anti-HCV antibodies and 70% with HCV RNA.
- National health insurance in Taiwan now covers genotype-specific and pangenotype direct-acting antivirals (DAAs) to combat this.
- Despite high success rates (97% SVR12), a small percentage of patients do not clear HCV after DAA treatment.
Purpose of the Study:
- To investigate the causes of direct-acting antiviral (DAA) treatment failure in Taiwanese patients with hepatitis C virus (HCV).
- To characterize the resistance-associated substitutions (RASs) and genetic profiles of HCV in DAA failure cases.
- To compare virologic findings with clinical adherence data.
Main Methods:
- A multi-center clinical and virologic study enrolled 147 patients who failed DAA therapy.
- Population sequencing and whole genome sequencing (WGS) were used to identify RASs in HCV NS3/4A, NS5A, and NS5B genes.
- Clinical adherence and HCV genotype consistency were assessed.
Main Results:
- Poor patient adherence was a significant clinical cause of DAA failure.
- Common RASs identified included NS5A-L31, NS5A-Y93, and NS5B-C316 for genotype-specific DAAs, and NS5A-L31, NS5A-A/Q/R30, and NS5A-Y93 for pangenotype DAAs.
- Whole genome sequencing revealed novel amino acid changes, and 12 cases suggested reinfection due to inconsistent HCV genotypes.
Conclusions:
- The study identified key virologic and clinical factors contributing to DAA failure in Taiwan.
- The identified drug resistance profiles differ from those reported in other countries.
- Findings underscore the importance of adherence monitoring and understanding specific RASs for optimizing HCV treatment strategies in Taiwan.
Abstract:
About 4% of the population in Taiwan are seropositive for anti-HCV Ab and 70% with HCV RNA. To address this high chronic hepatitis C disease load, Taiwan National Health Insurance started reimbursing genotype-specific DAAs in 2017 and pangenotype DAAs in mid-2018. With a 97% SVR12 rate, there were still 2-3% of patients that failed to clear HCV. To understand the causes of DAA failure in Taiwan, we conducted a multi-center, clinical, and virologic study. A total of 147 DAA-failure patients were recruited, and we searched HCV NS3/4A, NS5A and NS5B for known resistance-associated substitutions (RASs) by population sequencing, and conducted whole genome sequencing (WGS) for those without known RASs. A total of 107 patients received genotype-specific DAAs while 40 had pangenotype DAAs. Clinically, the important cause of failure is poor adherence. Virologically, common RASs in genotype-specific DAAs were NS5A-L31, NS5A-Y93, and NS5B-C316, while common RASs in pangenotype DAAs were NS5A-L31, NS5A-A/Q/R30, and NS5A-Y93. Additionally, new amino acid changes were found by WGS. Finally, we identified 12 cases with inconsistent baseline and post-treatment HCV genotypes, which is suggestive of re-infection rather than treatment failure. Our study described the drug resistance profile for DAA failure in Taiwan, showing differences from other countries.
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