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Updated: Oct 11, 2025

Using Human Differentially Expressed Gene Lists to Perform Downstream Pathway Enrichment Analysis and Target Prioritization
Published on: October 3, 2025
Clinically Relevant Genes and Proteins Modulated by Tocotrienols in Human Colon Cancer Cell Lines: Systematic Scoping
Ali Qusay Khalid1, Saatheeyavaane Bhuvanendran2, Kasthuri Bai Magalingam1
1Jeffery Cheah School of Medicine and Health Sciences, Monash University Malaysia, Bandar Sunway 47500, Malaysia.
Abstract:
The last decade has witnessed tremendous growth in tocotrienols (T3s) research, especially in the field of oncology, owing to potent anticancer property. Among the many types of cancers, colorectal cancer (CRC) is growing to become a serious global health threat to humans. Chemoprevention strategies in recent days are open to exploring alternative interventions to inhibit or delay carcinogenesis, especially with the use of bioactive natural compounds, such as tocotrienols. This scoping review aims to distil the large bodies of literature from various databases to identify the genes and their encoded modulations by tocotrienols and to explicate important mechanisms via which T3s combat CRC. For this scoping review, research papers published from 2010 to early 2021 related to T3s and human CRC cells were reviewed in compliance with the PRISMA guidelines. The study included research articles published in English, searchable on four literature databases (Ovid MEDLINE, PubMed, Scopus, and Embase) that reported differential expression of genes and proteins in human CRC cell lines following exposure to T3s. A total of 12 articles that fulfilled the inclusion and exclusion criteria of the study were short-listed for data extraction and analysis. The results from the analysis of these 12 articles showed that T3s, especially its γ and δ analogues, modulated the expression of 16 genes and their encoded proteins that are associated with several important CRC pathways (apoptosis, transcriptional dysregulation in cancer, and cancer progression). Further studies and validation work are required to scrutinize the specific role of T3s on these genes and proteins and to propose the use of T3s to develop adjuvant or multi-targeted therapy for CRC.
Insights
Tocotrienols (T3s), natural compounds, show promise in combating colorectal cancer (CRC) by modulating 16 key genes involved in cancer pathways. Further research may lead to T3s-based therapies for CRC.
Area of Science:
- Biochemistry
- Molecular Biology
- Oncology
Background:
- Colorectal cancer (CRC) is a significant global health concern.
- Tocotrienols (T3s) possess potent anticancer properties, making them a focus for chemoprevention.
- Natural compounds like T3s offer alternative interventions to inhibit or delay carcinogenesis.
Purpose of the Study:
- To review and identify genes modulated by tocotrienols (T3s) in colorectal cancer (CRC).
- To elucidate the mechanisms by which T3s combat CRC.
- To consolidate existing literature on T3s and CRC from 2010-2021.
Main Methods:
- Scoping review of research papers from 2010 to early 2021.
- Searched four databases (Ovid MEDLINE, PubMed, Scopus, Embase) for studies on T3s and human CRC cells.
- Included studies reporting differential gene/protein expression in CRC cell lines after T3s exposure, adhering to PRISMA guidelines.
Main Results:
- Analyzed 12 eligible articles.
- Identified that T3s, particularly gamma and delta analogues, modulate 16 genes and proteins.
- These modulated genes are linked to critical CRC pathways including apoptosis, transcriptional dysregulation, and cancer progression.
Conclusions:
- T3s demonstrate a capacity to influence key molecular pathways in CRC.
- Further studies are needed to validate the specific roles of T3s on these genes and proteins.
- T3s hold potential for developing adjuvant or multi-targeted therapies for colorectal cancer.
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