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Updated: Oct 11, 2025

Rapid Isolation of the Mitoribosome from HEK Cells
Published on: October 4, 2018
First-in-Class Inhibitors of the Ribosomal Oxygenase MINA53
Radosław P Nowak1, Anthony Tumber1,2, Eline Hendrix3
1Botnar Research Centre, Nuffield Orthopaedic Centre, University of Oxford, Headington OX3 7LD, U.K.
Abstract:
MINA53 is a JmjC domain 2-oxoglutarate-dependent oxygenase that catalyzes ribosomal hydroxylation and is a target of the oncogenic transcription factor c-MYC. Despite its anticancer target potential, no small-molecule MINA53 inhibitors are reported. Using ribosomal substrate fragments, we developed mass spectrometry assays for MINA53 and the related oxygenase NO66. These assays enabled the identification of 2-(aryl)alkylthio-3,4-dihydro-4-oxoypyrimidine-5-carboxylic acids as potent MINA53 inhibitors, with selectivity over NO66 and other JmjC oxygenases. Crystallographic studies with the JmjC demethylase KDM5B revealed active site binding but without direct metal chelation; however, molecular modeling investigations indicated that the inhibitors bind to MINA53 by directly interacting with the iron cofactor. The MINA53 inhibitors manifest evidence for target engagement and selectivity for MINA53 over KDM4-6. The MINA53 inhibitors show antiproliferative activity with solid cancer lines and sensitize cancer cells to conventional chemotherapy, suggesting that further work investigating their potential in combination therapies is warranted.
Insights
Researchers identified novel small-molecule inhibitors targeting MINA53, a protein linked to cancer. These compounds show promise in cancer treatment and combination therapies.
Area of Science:
- Biochemistry
- Molecular Biology
- Oncology
Background:
- MINA53 is a JmjC oxygenase involved in ribosomal hydroxylation and targeted by c-MYC.
- No small-molecule inhibitors for MINA53 have been previously reported.
- MINA53 presents a potential target for anticancer drug development.
Purpose of the Study:
- To develop and identify small-molecule inhibitors of MINA53.
- To assess the selectivity and mechanism of action of identified inhibitors.
- To evaluate the therapeutic potential of MINA53 inhibitors in cancer treatment.
Main Methods:
- Development of mass spectrometry assays for MINA53 and NO66 using ribosomal substrate fragments.
- High-throughput screening to identify MINA53 inhibitors.
- Crystallography and molecular modeling to elucidate inhibitor binding modes.
- In vitro assays to assess target engagement, selectivity, and antiproliferative activity.
Main Results:
- Identification of 2-(aryl)alkylthio-3,4-dihydro-4-oxopyrimidine-5-carboxylic acids as potent MINA53 inhibitors.
- Demonstrated selectivity of inhibitors for MINA53 over NO66 and other JmjC oxygenases (KDM4-6).
- Inhibitors bind to MINA53 via interaction with the iron cofactor and exhibit antiproliferative effects on solid cancer lines.
- MINA53 inhibitors sensitize cancer cells to conventional chemotherapy.
Conclusions:
- Novel MINA53 inhibitors have been discovered with demonstrated target engagement and selectivity.
- These inhibitors exhibit anticancer activity and enhance chemotherapy efficacy.
- Further investigation into MINA53 inhibitors for combination cancer therapies is warranted.
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